Gene Information

Name : XCC3115 (XCC3115)
Accession : NP_638462.2
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3689149 - 3690087 bp
Length : 939 bp
Strand : +
Note : -

DNA sequence :
ATGGCTCGTGTTCCACGTCGACTACGAATGGGTGCCGCTGCAGCGCTGCTGTGCGGTGCTACGTCGAGCTTCGCTCTGAA
TACGGCCAGCATCGTGTCATCAACGCTTTCGCCAGACTGCCTGGAGTATCGGGTGGTGGGCATTTGCTATTGGCTTTATT
GCACGTTGACGGGGTGCACGGTTCGCACCTCAATCAAAGTACGTCATTACGTTCCAGATGCTGTGGTCTCCAGCTATTCC
AACGTCGGTGAAAATCCCTGGGTTGAAGTGCGTGCGATGAGTAAGCCCAACGCGACTGCTCGCTCTGGAGGAGATGGAAC
AACCAATCATGACAACGAAAACAACCTGATCAAGTTCAAAAACGCAGATGTGATCGGCCACCCCGGTGGGCAGGTATTCA
GTCAATTTGCCAGCGCATCGGGATACGCATGCGAAGGTGCTGGTACTGCTTTCATGCCCTACTTGCTCAGCACCTTGGAT
ACGATTGCATGGCGCTACAACTTGCCAGAAGTCGTTTACCCCGAAGCGCTCATCCCTGGCTTGCGAGAGATAGGCTCTCG
TACAGACATGAATCTGTGGGGCGCCGTCTACCCCCGCGGAGGATTTATGCATCAGACCGATGACCACAAGGCCGGCGCTG
TGGTTGCGCAGCGCGCAGGCGACATCGTGACGCGCCGAGGCCAACTTCACGTCTATCAGCCCCTGCTCGCCAGTAGTCGA
GACGGTTATTGGCCGGCTGGCGCGCTGGTAGAAAGCGATGCCTCAACAGGTAAGTGGCAGCAGCTCACACCGCGCCTGTC
CTCTACTTGTGCGGTATTCCCCCAAAGCGGCTCGCTGCCTCAGGCAGCGCAGGGCGACTACGCGTGGGCTTTATGGCGCC
CTTACAGCTGCTGCCAGCGTCAAGGTCAGGTCTTCCTGGGCAGCGTCGATTTCAACTAA

Protein sequence :
MARVPRRLRMGAAAALLCGATSSFALNTASIVSSTLSPDCLEYRVVGICYWLYCTLTGCTVRTSIKVRHYVPDAVVSSYS
NVGENPWVEVRAMSKPNATARSGGDGTTNHDNENNLIKFKNADVIGHPGGQVFSQFASASGYACEGAGTAFMPYLLSTLD
TIAWRYNLPEVVYPEALIPGLREIGSRTDMNLWGAVYPRGGFMHQTDDHKAGAVVAQRAGDIVTRRGQLHVYQPLLASSR
DGYWPAGALVESDASTGKWQQLTPRLSSTCAVFPQSGSLPQAAQGDYAWALWRPYSCCQRQGQVFLGSVDFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-121 84
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 9e-114 81
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 1e-103 70
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 1e-96 68
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-97 68
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 7e-95 67
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 8e-75 50
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 8e-75 50
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 6e-66 50
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 1e-72 49
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 4e-66 48
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 1e-72 48
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 4e-67 48
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 4e-59 47