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Name : clpB (XCC3070) Accession : NP_638417.1 Strain : Xanthomonas campestris ATCC 33913 Genome accession: NC_003902 Putative virulence/resistance : Unknown Product : ATP-dependent Clp protease subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3634240 - 3636825 bp Length : 2586 bp Strand : - Note : - DNA sequence : ATGCGGATGGACAAGCTCACCTCGCGGTTCCAGCAGGCGCTGGCCGACGCGCAATCGCTGGCCGTGGGCCGCGACCACAA CATCATCGAACCCGTGCACGTGCTGGCCGCCTTGCTCGACCAGAGCGGCGGCAGCACGCGCCCGCTGCTGTCGCAGTCCG GCGTCAACGTGCCGGCACTGCGCGAGCGCCTGGGCGAAGCGCTGGACACCCTGCCCAAGGTGTCCGGGCAGGAAGGCAAC CTGTCGATCGGCAACGATCTCAATCGCCTGCTCAACCAGACCGACAAGCTCGCCCAGCAACATGGCGATGCCTTCATCGC CAGCGAGTGGTTCGTGCTGGCCGCTGCCGACGATGCCAGCCCGCTGGGCGTGGCCTTGCGCGCGGCCGGTGGCGACAAGA AGAAGATCGAAGCGGCCATCGATAAATTGCGCGGTGGCGAAACGGTGCAATCGGAAAATGCCGAGGAGCAGCGCCAGGCG CTGGAGAAGTACACCATCGACCTGACCGCGCGCGCGGAGAGCGGCAAGCTCGATCCGGTGATCGGCCGCGACGAAGAAAT CCGCCGCACCATCCAGGTGTTGCAGCGACGCACCAAAAACAACCCGGTGCTGATCGGCGAACCGGGCGTGGGCAAGACCG CCATTGTCGAAGGCCTGGCGCAACGCATCATCAACGGCGAGGTGCCCGAAGGCCTGCGCGGCAAGCGCGTGCTGTCGCTG GACATGGGCGCGCTGATTGCCGGTGCCAAATTCCGCGGCGAATTCGAAGAACGCCTGAAGGCGGTGCTCAGCGACCTGTC CAAGAACGAAGGCCAGATCATCCTGTTCATCGATGAGCTGCACACCATGGTCGGCGCCGGCAAGGCCGATGGCGCGATGG ATGCCGGCAACATGCTCAAGCCGGCGCTGGCGCGCGGCGAGCTGCATTGCATCGGCGCCACCACGCTGGACGAATACCGC AAGTACATCGAAAAAGACGCTGCGCTGGAGCGCCGTTTCCAGAAAGTTTTCGTGGGCGAGCCGACGGTGGAAGACACCAT CGCCATCCTGCGCGGCTTGAAGGAGCGCTACGCGGTGCATCACGGCGTGGAGATCACCGACCCGGCGATCGTGGCCGCGG CCACCTTGTCCAACCGCTACATCACCGACCGTCAGTTGCCGGACAAGGCCATCGACCTGATGGACGAAGCCGCATCGCGC ATCCGCATGGAGATCGATTCCAAGCCTGAAGAGCTCGACCGCCTGGAGCGCCGCCTGATCCAGCTCAAGATCCAGCGCGA GATGCTCAAGAAGGAAAAGGACGAGGCCTCGCGGCAACGTCTGGCCGATCTGGAAAGCGACATCGACAAGCTCGAGCGCG AATTCTCCGACCTCAACGAAGTGTGGAAGTCGGAGAAGGCCGCGCTGCAGGGCACCACCAAGATCAAGGAGCAGATCGAG CACGCCAAGCTGGAGCTGGAAGCGGCGCAGCGGCGCCAGGACTACGCCAAGATGAGCGAGATCCAGTACGGCGTATTGCC GCAGCTGGAAAAGCAGATGCTGCTGGCCAACGAAGTGGAGCATCACGACTTCAAGCTGGTGCAGGACCGCGTGACCGCCG AAGAAATCGCCGAGGTGGTGTCGCGTTGGACCGGTATCCCGGTCAACAAGATGCTCGAAGGCGAGCGCGACAAACTGCTG CGCATGGAAGACGAACTGCACCGCCGCGTGGTGGGGCAGGAAGAGGCGATCAAGGTGGTGTCCGATGCGGTGCGCCGCTC GCGTGCCGGCCTGTCCGATCCCAATCGTCCGAGCGGTTCGTTCCTGTTCCTGGGCCCGACCGGCGTGGGCAAGACCGAGC TGTGCAAGGCGTTGGCGGATTTCCTGTTCGACAGCACCGAGGCCATGATCCGCATCGACATGAGCGAGTTCATGGAGAAG CATTCGGTCTCGCGCCTGATCGGTGCGCCTCCGGGCTATGTGGGCTACGAGGAGGGCGGTTACCTCACCGAGGCGGTGCG GCGGCGCCCGTATTCGCTGATCCTGCTCGACGAAGTGGAGAAGGCGCACGCCGATGTCTTCAACATCCTGTTGCAGGTGC TCGACGATGGCCGCCTCACCGACGGCCAGGGACGTACCGTGGACTTCCGCAATACCGTCATCGTGATGACCTCCAACCTG GGCTCGCACCAGATCCAGGAGTTGTCCGGCGACGGCAGCGCCGAGGCCTACACGCAGATGAAGGCGGCGGTGATGGGCGT GGTGCAGGCGCACTTCCGCCCAGAATTCATCAACCGGCTCGACGACATCGTGGTGTTCCATCCGCTGGACAAGGCGCAGA TCAAGTCGATCGCGCGCATCCAGTTGCAGGGCCTGGAAAAGCGCCTGGCCGAACGCGGCCTCAAGCTGGACCTGGACGAC CCGGCGCTGGAATTGCTGGGCAATGTCGGCTTCGACCCGGTGTATGGCGCGCGCCCGCTGAAGCGTGCGATCCAGTCGCA GGTGGAAAACCCGCTGGCCCAGCAGATTCTCTCCGGCCAGTACACCAGCGGCGACACCGTGCGTGTACGCACCGAAGGTG GACATCTGGCGTTTACCAAGGGCTGA Protein sequence : MRMDKLTSRFQQALADAQSLAVGRDHNIIEPVHVLAALLDQSGGSTRPLLSQSGVNVPALRERLGEALDTLPKVSGQEGN LSIGNDLNRLLNQTDKLAQQHGDAFIASEWFVLAAADDASPLGVALRAAGGDKKKIEAAIDKLRGGETVQSENAEEQRQA LEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSL DMGALIAGAKFRGEFEERLKAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYR KYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRYITDRQLPDKAIDLMDEAASR IRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQRLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIE HAKLELEAAQRRQDYAKMSEIQYGVLPQLEKQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLEGERDKLL RMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEK HSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNL GSHQIQELSGDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDD PALELLGNVGFDPVYGARPLKRAIQSQVENPLAQQILSGQYTSGDTVRVRTEGGHLAFTKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-103 | 42 |
