Gene Information

Name : FI (XCC2988)
Accession : NP_638336.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Unknown
Product : phage-related tail protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3497
EC number : -
Position : 3542991 - 3544157 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence :
ATGTCCACTGCCTACCACCACGGCGTTCGCGTCATCGAAGTCAGCGCAGGTGCGCGCGTCATCCGCACCGTCTCCACTGC
CATTGTCGGCCTGGTCGCTACGGCGTCCGATGCGGATGAAAAGGTCTTCCCGCTCAACAAGGCTGTGATGCTCACCGACG
TGCTGGGTGCCATCGCCAGTGCCGGCACCAAAGGCACCTTGCGCGACACCCTGCAGGGCATCGCCGATCAGACCAATCCC
GTGACCGTGGTCGTGCGTGTGGCCGAAGACGAAGACGCGGACAAGACCTCGTCCAACGTCATCGGCGAGGCCAAGTCCAG
CGGTTACACCGGCCTATATGCCTTGCTCGCCGCGCAGGCACAGCTGGGCGTGCGGCCGCGCATCTTGGGCGCCCCTGGCC
TGGACACGCTGCCGGTGGCCAAGGCGCTTGCGACCATCGCCAAGAAGCTGCGCGCCATGGCCTATGTGCGACCGGTCGCC
GAGACCGTCGCGGAGGCAGTCACCTACCGCGGCCAGTTCAGCGACCGCGAGCTGATGCTGATCTGGCCGGACTTCTTGGC
CTTCGATACCACCACCAGCACCACGACCGCCGCGTACGCCACCGCGCGTGCGCTCGGTCTGCGCGCCAAGATCGACACCG
AACAGGGCTGGCACAAGAGTCTGTCCAACGTGCCCGTGGCCGGCGTCACCGGCATCTCCAAGGATGTGCATTGGGATCTG
CAGGATCCGGCCACCGATGCCGGCGTGCTCAACGAGGGCGACATCACCACGCTGATCACCTTCAACGGCCAGCGCTTCTG
GGGCTCGCGCACGTGCGCCGAAGACAACATGTTCGCCTTCGAGACGGCCACGCGCACCGCGCAGGTCCTGGCCGACACCA
TCGCCGAGGGCGTGGCGTTCTACGTCGACAAGCCGATGCATCCCTCGCTGGTCAAAGACATCGTCGAAGACATCAACGCC
AAGTTCCGCGACCTGAAGGCATCCGGCTATCTGATCGACGCCACCGCCTGGTTCGACGGCACGGTCAATAGCGCCACCAC
GCTTGCCGATGGCGCGCTGCGCATTGACTACGACTACACGCCGGTGCCGCCGCTGGAGAACCTGCAGCTGTACCAGAAGA
TCACCACCAGCTACCTGGCCGACTTCGCCGAACGCGTCAACGCGTAA

Protein sequence :
MSTAYHHGVRVIEVSAGARVIRTVSTAIVGLVATASDADEKVFPLNKAVMLTDVLGAIASAGTKGTLRDTLQGIADQTNP
VTVVVRVAEDEDADKTSSNVIGEAKSSGYTGLYALLAAQAQLGVRPRILGAPGLDTLPVAKALATIAKKLRAMAYVRPVA
ETVAEAVTYRGQFSDRELMLIWPDFLAFDTTTSTTTAAYATARALGLRAKIDTEQGWHKSLSNVPVAGVTGISKDVHWDL
QDPATDAGVLNEGDITTLITFNGQRFWGSRTCAEDNMFAFETATRTAQVLADTIAEGVAFYVDKPMHPSLVKDIVEDINA
KFRDLKASGYLIDATAWFDGTVNSATTLADGALRIDYDYTPVPPLENLQLYQKITTSYLADFAERVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 3e-99 63
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 8e-94 61
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 8e-94 61