Gene Information

Name : N (XCC2972)
Accession : NP_638320.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Unknown
Product : phage-related major capsid protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3532850 - 3533866 bp
Length : 1017 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAACGCCACCCGCCTGCAGTTCAATCAGTTCGCCGAGCAGATCGCCAAGCTCAATGGCATCACTTCCGCGTTCCA
TTCCTTCGCCGTCGATCCGACCGTGCAGCAGAAGCTGGAAACGCGCATGCAGGAATCCAGCGAGTTCCTGTCCAAGATCA
ACATCATCCCGGTGGACGAATTGTCCGGCCAAAAGGTGGGCATCGGCGTCACTGGCAGCATTGCCAGCCGCACCGACACC
GGCGCCGGCAAGACCCGCACCCCGCGCAACGTCGCCGCGCTCGACAAGAACGAATACGTCGCCAAGAAGACCGACTTCGA
TACCGCGATTCCGTATGCGCTGCTCGATGCGTGGGCCAAATTCCCGGACTTCCAGGCGCGCCTGCGCGATGCGATCGTCA
AGCGTCAGGCACTGGACCGTCTGCAGATTGGCTTCAACGGCACGCACGCCGCCGCCGACACCGACCGCGCCGCGTTCCCG
TTGCTGGAAGACGTCAACATCGGTTGGATGCAGCAGTACCGCACCAACGCTGCCCAGCGCGTGCTGGCCAGCGGCAAGAC
GGCAGGCAAGATGGTCATCGGCGCCGGCGATGGTGCGGACTACCGCAACCTCGACGCACTGGTGTTCGATGTGGTGAGCA
ACCTGCTGGATCCGTGGCACCGCAAGGATCCGAGCCTGGTCGTGGTGCTCGGCCGCGACCTGATGCACGACAAGTATTTC
CCGATGGTCAATAAGGACCAGGCGGCCAGCGAGAAGATCGCCACCGACCTGATTCTGAGCCAGCGCCGCGTCGGCGGCCT
GCAGGTGGCCGAGGTGCCGTACCTGCCGGACGGCGCGCTGATGGTCACCTCGCTGGCGAACCTGTCGATCTACTACCAGA
CCGGCGGCCGTCGTCGTTACATCCAGGAAGTGCCCGCCCGCGATCGCATCGAGAACTACGAGTCCTCCAACGATGCCTAC
GTGGTCGAAGACTACGGCCTGGGCTGCGTGGTCGAGCACATCGAGATCGAGGCCTAA

Protein sequence :
MQNATRLQFNQFAEQIAKLNGITSAFHSFAVDPTVQQKLETRMQESSEFLSKINIIPVDELSGQKVGIGVTGSIASRTDT
GAGKTRTPRNVAALDKNEYVAKKTDFDTAIPYALLDAWAKFPDFQARLRDAIVKRQALDRLQIGFNGTHAAADTDRAAFP
LLEDVNIGWMQQYRTNAAQRVLASGKTAGKMVIGAGDGADYRNLDALVFDVVSNLLDPWHRKDPSLVVVLGRDLMHDKYF
PMVNKDQAASEKIATDLILSQRRVGGLQVAEVPYLPDGALMVTSLANLSIYYQTGGRRRYIQEVPARDRIENYESSNDAY
VVEDYGLGCVVEHIEIEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 2e-118 72
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 2e-76 50
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 2e-76 50