Gene Information

Name : O (XCC2971)
Accession : NP_638319.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Unknown
Product : phage-related capsid scaffold protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3531959 - 3532801 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGTCGGCCAAGGCCAAGAAGTTCCGTTCCAACTGGTTCCGCGTGGCCGTCGAAGGCGCCACCACCGATGGCCGCACGAT
TCAGCGCAGCTGGATCGACGACATGGCCGCCACCTACAACCGCGAGACCTACGGTGCGCGCATCTGGATCGAGCACATGC
GCAGCCTGCTGCCGGACTCGCCGTTCCGCGCGTATGGCGATGTCACCGCCGTCAAAGCCGAAGAGGTCGAGATCGACGGA
ACCAAGCGCCTGGCGCTGTTTGCACAGATCGAGCCGACCGCCGACCTGATAACCATCAATAAGTCCAAGCAGAAGCTCTA
CACCAGCATCGAGGTGCAGGAGAAGTTCGCCAATACCGGCAAGGCGTATCTGGTCGGCCTGGCCGTGACCGATTCACCGG
CCAGCCTGGGCACCTCCATGCTCAGCTTCGCTAGCCAAAACCCCGACGCCAATCCGCTGGCCGATCGTAAGCAGTCACCG
GGCAACCTGTTCACCGTCGCCGAAGAAACCGCGCTGGAATTTAGCGAAGTCAGCGAAGGTCCGGTCGCCAACCTGCTGAG
CCGGATCCGCACCGCGCTCAAGAGCGAGGACGCCACCAGCATCACCGCCGAGCAGTTCGCAGAGCTTGGCGAAGGCGTCG
AAGAGATCGCCGAGCACGTGCGCGGCCAGGACGAACGCTTCAACCGCCTGCAGGCCGAACACGCCGAGCAGAAGACCAAG
CACGAACAGCTGGCAAACGACCTGGCACAGCTGCGCGAGTCGCTCTCGCAGCAGCCCGACCCCGCACAGCCCGCACGCCC
GGTGGTCACCGGCGGCGGCGTGGCCGTGCTGACCGACTGCTGA

Protein sequence :
MSAKAKKFRSNWFRVAVEGATTDGRTIQRSWIDDMAATYNRETYGARIWIEHMRSLLPDSPFRAYGDVTAVKAEEVEIDG
TKRLALFAQIEPTADLITINKSKQKLYTSIEVQEKFANTGKAYLVGLAVTDSPASLGTSMLSFASQNPDANPLADRKQSP
GNLFTVAEETALEFSEVSEGPVANLLSRIRTALKSEDATSITAEQFAELGEGVEEIAEHVRGQDERFNRLQAEHAEQKTK
HEQLANDLAQLRESLSQQPDPAQPARPVVTGGGVAVLTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 3e-67 52
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 6e-46 41
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 6e-46 41