|
Name : umuC (XCC2964) Accession : NP_638312.1 Strain : Xanthomonas campestris ATCC 33913 Genome accession: NC_003902 Putative virulence/resistance : Unknown Product : polymerase V subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 3524399 - 3525685 bp Length : 1287 bp Strand : + Note : - DNA sequence : ATGTTCGCGCTGATCGACGGCAATAACTTCTACGCTAGCTGCGAGCGCGTGTTCCAGCCCGAGCTGCGTGGCAGGCCGTT GGTCGTGCTCAGCAACAACGATGGCTGCGCTATTGCTCGATCGGACGAGGCCAAAGCCCTAGGTGTCACGATGGGCCAGC CGATCCACAAGGTGCCACCGCAGATCCGTCGCCGGCTAGCGCTGCGCTCCGCAAATTTCGGTCTCTACGGCGACATCGCT TCTCGCATTGGCGTCATCCTGCGTCAGGCCGCGCCACGCGTGGAGGTGTATTCGATCGACGAGTCGTTCCTCGACCTGGC CGGCATCCGCGATTGCCGGCAGCTGGCGGTCGACCTGCGCGAGCGAGTTCACCAATGGACGGGCATCCCCAACTGCATTG GCATCGCGCCGACCAAGACCTTGGCCAAGCTGGCCAACCGGGTCGCCAAGGATGCAGCGCGTAAGCCGGGCAGCTACCCA GCTAGTCTGGCCGGCGTCTGTGACCTGGCTGCGCTCAGCGCCAGTGAGCTCGATGCGGTGCTGCGAGCCACGGCGGTTGG CGACCTCTGGGGCGTTGGCAGGCGCTGGGGCGCGAGGCTGCAGGCACGCGGCGTCTTTACGGCAGCCGATCTGCGAGACG CCGCTGCAGACGACTTGCTAGCGGAGTTCGGTGTGGTCATGGCGCGCACGCAACGGGAGTTGCAGGGCCATGCATGCCTG CAGCTGGAGGAAGTCGAGCCCGACCGTCAGCAGATCATGGTCAGCCGGTCGTTCGGGACCTGGGTGACCGATCCACAAGA TATGGCGGAGGCGCTGGCAACTTTTGCCATGCGCGCCACCGAGAAGCTGCGCGCACGCGGGCTGACCACATGCGCCATTG GCATCTTTGCCGAGACGGATTCGTTCAAGCCCGGTGTGCCGCAGCACAACCCATCACGCACCGCGCCACTTGCCTCGGCT ACATCCGACAGCCGCGTGGTGCTCACGGTTGTGCGCCGGCTGCTCCAGGGCTTCATGCGCGATGGCTTCACCTACAAGAA GGCCGGCGTGTGCCTAATGGATCTCGCCGCGCCCGAGGATCTGCAGGGCGACCTCTTCACCCCGGCACGCATAGGCGACG ACAAGCTGATGAGCACCCTGGATGCCATCAACCGGCGGTTCGGTCGCGGCACGGCCGGGCTGGGTGCAAGCGGCTGGCAG AAGTCCCCCGAATGGGCATCGCGGCAAGATCTGCTATCGGGCCGCTTCACCACATCGCTAGCTGACCTCCCTCGCGCCTC CTGCTAG Protein sequence : MFALIDGNNFYASCERVFQPELRGRPLVVLSNNDGCAIARSDEAKALGVTMGQPIHKVPPQIRRRLALRSANFGLYGDIA SRIGVILRQAAPRVEVYSIDESFLDLAGIRDCRQLAVDLRERVHQWTGIPNCIGIAPTKTLAKLANRVAKDAARKPGSYP ASLAGVCDLAALSASELDAVLRATAVGDLWGVGRRWGARLQARGVFTAADLRDAAADDLLAEFGVVMARTQRELQGHACL QLEEVEPDRQQIMVSRSFGTWVTDPQDMAEALATFAMRATEKLRARGLTTCAIGIFAETDSFKPGVPQHNPSRTAPLASA TSDSRVVLTVVRRLLQGFMRDGFTYKKAGVCLMDLAAPEDLQGDLFTPARIGDDKLMSTLDAINRRFGRGTAGLGASGWQ KSPEWASRQDLLSGRFTTSLADLPRASC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-59 | 42 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 7e-41 | 41 |
