Gene Information

Name : XCC2819 (XCC2819)
Accession : NP_638167.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Virulence
Product : amino acid transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 3327694 - 3329073 bp
Length : 1380 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGACACCCCAGGCCGCAGCGACGCGGCCACGCTGGAACGCTTCGGCTACGCCCAGGAACTCAAGCGGCAGCTCAG
CCTGAAGGACCTGCTGATCTATGGCCTGGTGTTCATGGTGCCGACCGCGCCGTTCTCGATCTTCGGCGGGGTATTCGACA
TCAGCGCGGGAATGGTGCCGCTGACCTATCTGGTGGGCTTCGTGGCAATGCTGTTCACCGCACTGAGCTACCAGCAGATG
TCGCAGGCGTTTCCGGTGGCCGGTTCGGTGTATGCGTATGTGGGGCGCGGCTTGAGCGGCGGCATGGGATTTCTGGCCGG
CTGGGCCATCCTGCTGGACTATCTACTGGTACCCACCCTGATCTACGTGGTCGGCGCCAACGCCATGCACAACGTGCTGC
CCCAGGTGCCGCAGCCCGCGTGGATCGCCTTCTTCGTGGTGCTCAACACGGTGGTCAATCTGCGCGGCATCGAGACCACT
GCGCGTGCCAACCGCTTCTTCCTGTATGCGCAGCTCATCGTGCTGGCGCTGTTCGTGGTGCTGGCGACACTGGCCATCCA
GCGCGGCGTCAACGGTGCGCAGTGGACCCTGCGCCCGTTCTACAACCCGCAGGCATTTTCGCCGCAGTTGATTTTCAGTG
CACTGTCGGTGGCGGTGGTGTCGTTCCTGGGCTTCGATGCGATCTCCACGCTGTCGGAGGAAGCCCGCGGCGGCAACCGG
GTGGTCGGACGCGCGACGCTGTTGGCGTTGGTGCTGGTGGCCGGCCTGTTCGTGCTGCAGACCTGGCTGGCAGCGTTGCT
GCAGCCGCACTTGCAGCGCTACCCCAGCGCGCAAGCGTCCAACGATGCGTTCTTCGAGATCGGGCGGCTGATTGCCGGGC
CGTGGATGCAGATTGTGATTGCGCTGACGGTGGCCATCAGTGCGGCGATTGCCAATTCGTTGGTGGCACAGGCGGCCACC
TCGCGGCTACTGTTCGCAATGGCACGCGACCGCCAATTGCCCGCGTTCCTCCGCTATATCCATCCGCGCACTGGCGTGCC
GCAGCGGGCGATCCTGCTGGTGGCGGCCCTGAGCATGGTGCTGGGGGAAGTGTTCGTCGGGCAGATCGCGTTGCTGTCCT
CGCTATGCAATGTGGGTGCGCTTACCGCCTTCGTGCTGCTGCATGTGGCGGTGCTTTGGCACTTTCGCGCGCATGGCCGC
AAGGTGCTGCACGGAGTGGTGCCAGTGATCGGCATCGTGATCCTGGCCTATGTGCTGATCAATGCCGACCTGCATGCGCA
GCTGGGCGGCAGCGCCTGGATGGTGGTCGGCCTGGCCGTGCTGGCCTTCCTCAAGTTCAGCGGGCGCTCGACCGAATTCC
GCGCTACTGACGCGTTGTAA

Protein sequence : 
MTDTPGRSDAATLERFGYAQELKRQLSLKDLLIYGLVFMVPTAPFSIFGGVFDISAGMVPLTYLVGFVAMLFTALSYQQM
SQAFPVAGSVYAYVGRGLSGGMGFLAGWAILLDYLLVPTLIYVVGANAMHNVLPQVPQPAWIAFFVVLNTVVNLRGIETT
ARANRFFLYAQLIVLALFVVLATLAIQRGVNGAQWTLRPFYNPQAFSPQLIFSALSVAVVSFLGFDAISTLSEEARGGNR
VVGRATLLALVLVAGLFVLQTWLAALLQPHLQRYPSAQASNDAFFEIGRLIAGPWMQIVIALTVAISAAIANSLVAQAAT
SRLLFAMARDRQLPAFLRYIHPRTGVPQRAILLVAALSMVLGEVFVGQIALLSSLCNVGALTAFVLLHVAVLWHFRAHGR
KVLHGVVPVIGIVILAYVLINADLHAQLGGSAWMVVGLAVLAFLKFSGRSTEFRATDAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 4e-70 44
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 4e-70 44
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 7e-71 44
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 7e-71 44
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 5e-67 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XCC2819 NP_638167.1 amino acid transporter VFG0480 Protein 2e-70 44