|
Name : intS (XCC2110) Accession : NP_637474.1 Strain : Xanthomonas campestris ATCC 33913 Genome accession: NC_003902 Putative virulence/resistance : Unknown Product : phage-related integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2494702 - 2496639 bp Length : 1938 bp Strand : - Note : - DNA sequence : TTGATGATGGCACTCTCTGATCTGACCGTGCGGCAAGCCAAGGCCGCCGAGAAAACCTACAGCATCCCTGACACTGACGG CCTCGGCCTTGTAGTCGCCCCCACCGGCGGCAAATCGTGGCATCTGCGCTACTACTGGCTCGGCAAGCAAAAGCGCATCT CTTTGGGCAACTACCCCGAGGTCGGACTGCGCGAAGCACGCACCTTGCGTGATGAAGCCCGAGCGCTCGTGGCGAAGGGC ATCAATCCCCATGCTGACCGCAAACAGAAGCGACGCGCTATCAAGCTAGCCTCGGACTACACGTTCAAGGCCGTCTTCGA TGCCTGGGTCGAGCATCGCGCGAAGGAACTCAAGGAAGGCAGAAACAGCACGCTGTCGCAGATCCAGAGAATCTTCGGAA AGGACGTGCTGCCCAGCCTTGAGAGGATGTCGATCTACGACATTCGCCGACCTCAACTCCTGGGCGTCCTGGCGCGGATC GAGCGGCGCAAGGCTTTCACCACTACCGAGAAGGTCCGCACTTGGCTGAGCCAGTTGTTCCGCTACGCCCTGGTCATTGT CGAGGGCATGGAGGCCAATCCGGCCACAGACCTCGACGTGGTGGCCGAGCCCAAGCCGCCGGTGAGCCACAATCCCTACC TGCGTCTGCCCGAACTGCCCGACTTCCTCCGCAAGCTCAGGCTCTACAACCCGCGTGGCTGGCAAACGCAGCTCGGCATT CGACTGCTGTTCCTGACCGGGGTGCGTACCGGCGAACTGCGACTGGCTACACCGGAGCAGTTCGACCTCGACCGCGGTCT GTGGATTATTCCGCCGCAGATCGTCAAGCAGCTTCAGGACGAGATGCGCAAGGCCGGCAAGCGCCCGCATGACATACCGC CTTACATCGTGCCTCTGTCTGTCCAGGCGATTGAGATAGTGCGCTACCTCCTGGGCGTAATGCGGCCTGCCCAGAAGCAT CTGCTGGCGCACCGCAGCGAACTCAAGAAGCGCATCAGTGAGAACACCCTCAACGCTGCCTTGAAACGAGTGGGCTACGA CGCCCAACTGACCGGCCATGGCATTCGGGGAACGATTTCTACGGCGCTCAACGAGATCGGCTATCCCAAGATTTGGGTGG ACGCGCAGCTTTCGCACTCCGATCCGAACAAGGTGAGTTCGGCCTACAACCACGCCAAGTATGTCGAGCCGCGCCGCCGG ATGATGCAGGATTGGGCCGACCGTCTTGACCTGCTCGAACAGGGCAAAGTGGAAGCTGCCAGTACACATCTAACCATCCA TATCGAAGGGGTGCCAGCGATGGCGGAAGAGCCGGCGGCCATCGCCGCTGTTTCTGCTAAAGCCGCCGTGTCGTCCACGC CGATCGTTGTGGTGCCAAGTACTGAGGGAACTACCTTCCAGCGGCTGTCGCAGGTGCCTCCGCCCCCCACTCGAACGCCG GAACCGGAAGCGTCCGCAATCCAGCGCGAGCGTGAGGAAATGCTGGCCATGTACGAGTCGCCTTGCTGCCTGCCGGTGCC GCTGTTCGGCAAGCTGGCCGGTAAGTCCAAGGACCAGATCAACCGCGAACTGAAGGCAGGCAAGCTGCTGTCCATTAGCC TGGGTAATCGAGGGCAGCGTGTTCCCGATTGGCAACTGGTGCCACTCAAGCACAAGCTGACCCAGGTCCTCATGAATCAG TGCCAAGGAGCGGACTCGTGGGACCTGTTCCGAATGCTGACCCGACCGCACACGGATCTTGGTGATCGCGCAGCGATTGA TGTAGTCACGCCGACCAACGTGCTCGCGATCGTTCGGACCATCATGGGCGACCAGTCTTTCGAAAAGGTGCGAACGCTGC AAAGCAGTGAATCAGTAGGGGAGCGCGCACAGCAGCAACCTCTTCACCAGATTTCGGACCAAGAAGCGCGGGAGCGGCCG AGTTCGCCTTCGCTGTAA Protein sequence : MMMALSDLTVRQAKAAEKTYSIPDTDGLGLVVAPTGGKSWHLRYYWLGKQKRISLGNYPEVGLREARTLRDEARALVAKG INPHADRKQKRRAIKLASDYTFKAVFDAWVEHRAKELKEGRNSTLSQIQRIFGKDVLPSLERMSIYDIRRPQLLGVLARI ERRKAFTTTEKVRTWLSQLFRYALVIVEGMEANPATDLDVVAEPKPPVSHNPYLRLPELPDFLRKLRLYNPRGWQTQLGI RLLFLTGVRTGELRLATPEQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPHDIPPYIVPLSVQAIEIVRYLLGVMRPAQKH LLAHRSELKKRISENTLNAALKRVGYDAQLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRR MMQDWADRLDLLEQGKVEAASTHLTIHIEGVPAMAEEPAAIAAVSAKAAVSSTPIVVVPSTEGTTFQRLSQVPPPPTRTP EPEASAIQREREEMLAMYESPCCLPVPLFGKLAGKSKDQINRELKAGKLLSISLGNRGQRVPDWQLVPLKHKLTQVLMNQ CQGADSWDLFRMLTRPHTDLGDRAAIDVVTPTNVLAIVRTIMGDQSFEKVRTLQSSESVGERAQQQPLHQISDQEARERP SSPSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | AAN62094.1 | putative integrase | Not tested | PAGI-2(C) | Protein | 0.0 | 85 |
| unnamed | AFG30104.1 | Int | Not tested | PAGI-2 | Protein | 0.0 | 81 |
