Gene Information

Name : gacA (XCC2085)
Accession : NP_637450.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2458773 - 2459420 bp
Length : 648 bp
Strand : -
Note : -

DNA sequence : 
ATGACAATCAGAGTTTTTCTGATCGACGATCATGCACTCGTGCGTACCGGCATGAAGATGATCCTGTCCAAGGAAGTGGA
CATCGAAGTGGTGGGCGAAGCAGAGAGTGGGGAAGCGGCGCTGCCGCAGATTCGCCAGCTCAAGCCGGGCATCGTGTTAT
GCGATCTGCATCTGCCGGGAGTCAGCGGGCTGGAGATCACTGAGCGCATCGTCAAAGGCGACTACGGCACGCGGGTCATC
ATCGTGTCGGTGCTGGAAGATGGCCCGCTGCCCAAGCGGTTGCTCGAAGCCGGCGCGTCCGGCTATGTCGGCAAGGGCGG
CGACGCGCACGAGTTGCTGCGCGCCGTGCGTGAAGTTGCGCTGGGCCGTCGTTATCTCGGCAACACCATCGCGCAGAACC
TTGCGCTCTCCAACTTGGAAGGTGGCGGTTCGCCCTTCGATGCGCTGTCGCCACGTGAGCTTGAGGTGGCGCTGCTGCTG
ACGCAGGGCCTGCGCCAGGAAGACATCGCCAAGCGCCTGAATCTCAGCGCCAAGACCATCAACACCCACAAGGCGCGCCT
GTTCGAAAAGGTCGGCATCCAGGACAACATCGCCCTGGCGCGCCTGGCCAATCAATACGGCCTGACCGATCCCGCACGTA
CGCTGTGA

Protein sequence : 
MTIRVFLIDDHALVRTGMKMILSKEVDIEVVGEAESGEAALPQIRQLKPGIVLCDLHLPGVSGLEITERIVKGDYGTRVI
IVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALGRRYLGNTIAQNLALSNLEGGGSPFDALSPRELEVALLL
TQGLRQEDIAKRLNLSAKTINTHKARLFEKVGIQDNIALARLANQYGLTDPARTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-35 45
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-35 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacA NP_637450.1 LuxR family transcriptional regulator VFG1889 Protein 6e-36 43