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Name : rbfC (XCC1928) Accession : NP_637293.1 Strain : Xanthomonas campestris ATCC 33913 Genome accession: NC_003902 Putative virulence/resistance : Virulence Product : O-antigen biosynthesis protein Function : - COG functional category : R : General function prediction only COG ID : COG1216 EC number : - Position : 2258860 - 2262471 bp Length : 3612 bp Strand : - Note : - DNA sequence : TTGACGATCCCGATGCCCACTTCATTTGCTGCCACCGCCACTGCGCCGCGGGTCACCGTGGCGGTTCCCGCATACAGAGC GACTTTCCTGAAAACCGCCCTGGACAGCGTGCTCGCGCAGGACATGCACGACCTGGAACTGCTGATCTGCGATGACTGTC CGACCGATGCCGTCGCCGAGGTCGTGAAAAATTTCCTGGACTCGGAACACGGTGCGCAGATTCGCTATCTGCGCAACCCG CAGCCGCTGCTGGAAGTGGGCAACTTCGGCCGATGCATCGCACAGGCACGTGGCACCTACCTCAAATTCCTCTGCGATGA CGACGTGCTGCTGCCCGGTTGCCTAACCGCAATGGCCGACGTGCTCGACCGGCACCCGGAAGTAGCACTGGTCTCATCGC GCCGCCAACTGATTGATGAGCGCGGCGCTCTGCTGCCGGAATCGGGCGCAAACGCAATTCCGTTCGAGGGCGATGTCTGT GTGCACGGCCAGGAGCTGGTCTCCTTTCTGGCAGAGCGCACCTTGAACTTTATCGGCGAACCCAGCACGGTGATGTTCCG CACCGCGCAGATGCGCCCCCATGCCGATGCGCCGTTCTCGCTGCAGGGGCGGCGTATCCAGTGGCTGGGCGACCTCACCA TGTACGTCAATTTGCTGCGCAAGGGCCACCTGGCCATGTTGCAAAGTCCATTGTCGTGCTTCCGCATTTCCGCCGGACAG GTCAGCAATGCCGCGCGTCTGAAGCCCGACATCGGCCGTGCCGGTTTCACCGCGTTCCGCACAGCTATTGGCGAACTGGG CTGGCAGCGCGCCGTGGACAACCACCAGGTCGGGGTCAGGACGCTGGAGGGCGCGCAGCCCTTCGTTGCGCTGGATCTGG GCGTGCGCGTGGATCGCATGCTTCGCGGTCTGCCGCCGGTTCTGCCGAGCAGTGGCGAGATCCTGCGCAATTGGCTGGAT CAGCGCGTGCCCGACAACGCCCAGCACCGGCTGATCGAGGCGCGCTTTCAGGCCGCCGGCGGCGGCCCCCTGATCTGCAT CGTGTTGCTGGATCGTCATGGCGACGCAGAGGCGATCGACGCCACCGTCCAGAGCCTGATCGCGCAGGCCTGCCAGTATT CTCGGATACAGCTGCGTATCCTAAGCCCACTGGCCGTGGTCACGCCGCAAACAGCGCCGTTCTCGATCCAGCTGCACCGC CACGAGGGCTCACTGGCGCAACTCGAGGCAATCAATGCGCTGTCCGCCACCGAGTCAGCCGACTGGCTACTGCCGGTCAA GGCTGGCGCCACCTTCACCGCCTCGGGCCTGCTCACCGTCGCGCTGGATCTGCTCGGCGACGACAGCCTGCGCGCGGTCT ATGCCGATGAAATGATCCGTGCCGAAGACGGCGAACTGTCGGCGCTGCTGCGTCCGGACTTCAACCTGGATCTGCTGCTG TCGATGCCGGCCAGCATGGTCCGTAACTGGCTCTACAGGCGCGAGATCTTCGTTGCAGCCGGCGGACTGGACCCGGCGTT GACCGACGCGGCGGAACTGGATCTGCTGCTGCGCCTGATCGACGCCGGTGGCCTTGACGGTCTGGGCCACGTCCACGAAC CGCTGCTGGTGAGTCCCACTTCGCGCGTCTGGTCGCACCCGTCCGAGCAGCAGGCCTTGCTGCGTCACCTGCACCACCGC AGCTACGCACAGGCAAAGATCCACAGCCACCTGCCCGGCTGCTATCGCATCGAGTACGGGCATGCGCACACGCCGGGGGT GTCGATCATCGTCCCCACCAAGAACCAGCTCGGCATGCTGCAGCGCTGCGTGGAGACGCTGCTCGAAAAGACCGCCTATT CCAACTACGAGCTACTGATCGTCGACAACGGCAGCACCGACGCCGACGCATGTCAGTGGCTGGATGGCATCGAAGCAATG GACAGCCCGCAATTGCGCGTGCTGCGCTACCCGCATCCGTTCAACTATGCAGCCATGAACAACCTGGCGGCGCAGCATGC CAGGGGCGAGTATCTGGTCCTGCTGAACAACGACACCGCGATCCTGCAGGAGAACTGGCTGGATGCGCTGCTCAACCACG CGCAACGGCCGGAGGTGGGCGTGGTTGGCGCAAAGCTGCTGTATCCCAACGGCACCGTCCAGCACGCCGGCGTGGTGCTG GGCTTGCGTGGACCCGCCGAGCATCCCTTCAACGGCCAGGCGCTGGATGCACCCGGTTACATGTACCGGCTGCAGGTGGA TCAGAACTACAGTGCGGTCACAGGTGCATGCATGATGGTACGCGCCAGCCTCTACGCCGAAGTCGGTGGCCTGGACGAGG ATGTTTTCAAGGTTTCCTACAACGATGTGGATCTGTGCCTGAAGATCCGTCAGGCCGGTTATCTGGTGGTCTGGACACCA CATGCTGTGCTGCTGCATGAGGGCAGCGTCAGCCAGACACAGGTGGATACCGCCCCGCAGCTGGCCAAGGTGCAGCGCTT CGAGGCCGAACAAGAGGCCATGTACCGCAAATGGCTCCCCTGGATCGCAAACGACCCGGCATACAACCGCAATCTGAACC TGAATGGCGACGCCTTCCAGGTGGAAGATAACAACAGTCTGACCTGGCGCCCGTTGCGTTGGCGTCCGCTACCCACCGTG CTGGCGATGACTGCAGACCAGACTGGCTGCGGCAACTACCGCATCATCCAGCCCGTGCACGCCATGCAGGCGGCCGGACT GGCCGACGCGATCTGGTCGCTGCGCTACCTGTCGCCCGTGGAGATGCAGCGCCTCCAGCCCGAGACATTGGTGCTGCAAC GGCAGATGTTTGATTACAACCTGGAGCCGCAGCAACGTGGCACCCGCTTCAGCAACTGCTTCAAGGTGGCGGAACTGGAC GACTACCTGCCCAACGTGCCGCGCAAGAGCCTGCATCGTGATGCCATTCCCAACGACATCATGCGCAGCATGCGCAGATC GTTGGCGATGGTGGACCGCTTCGTCGTCTCGACACCGGCGCTGGCGGAGGCATTGCACGGCCTGCACCGCGACACCCGGG TCGTGGAGAACCGCCTGCCGCTACCGTGGTGGCGGGACCGGCAAGGCCAGCGCCGCCAGGGCAAGCGCCCGCGCGTTGGC TGGGGCGGCGGCGGCGGCCACCAGGGTGACCTGGAAATGATCGAGGAAGTGATCAAGGCGCTGGCCACAGAGGTGGAGTG GGTGTTCTTCGGCATGTGCCCGGAAAGCCTGCAGCCTTACGTCCACGAGTTCCACCCCGGCGTGCCTATCGATCTCTACC CCGCAAAGCTGGCCGGACTGAACCTTGACCTGGCGCTGGCGCCGCTGGAAGACAACCTGTTCAATCAGTGCAAGAGCAAC CTGCGCCTGCTGGAGTACGGTGCCTGCGGCTTCCCGGTGGTATGCAGCGACGTGCGCCCCTACCAGGGTTCGCTCCCTGT GACCCGCGTGCGCCCGCGTTACCGGGACTGGGTTGAGGCAATCCGCATGCATACCCACGATCTGGACGCTGCCGCTGCCG CCGGCGATGCACTGCGTGCGGCAGTACACCGCGACTGGATGCTGGACCAGGACCACGCTGCGCATTGGCTGACGCAGTGG TTGCCCGACTGA Protein sequence : MTIPMPTSFAATATAPRVTVAVPAYRATFLKTALDSVLAQDMHDLELLICDDCPTDAVAEVVKNFLDSEHGAQIRYLRNP QPLLEVGNFGRCIAQARGTYLKFLCDDDVLLPGCLTAMADVLDRHPEVALVSSRRQLIDERGALLPESGANAIPFEGDVC VHGQELVSFLAERTLNFIGEPSTVMFRTAQMRPHADAPFSLQGRRIQWLGDLTMYVNLLRKGHLAMLQSPLSCFRISAGQ VSNAARLKPDIGRAGFTAFRTAIGELGWQRAVDNHQVGVRTLEGAQPFVALDLGVRVDRMLRGLPPVLPSSGEILRNWLD QRVPDNAQHRLIEARFQAAGGGPLICIVLLDRHGDAEAIDATVQSLIAQACQYSRIQLRILSPLAVVTPQTAPFSIQLHR HEGSLAQLEAINALSATESADWLLPVKAGATFTASGLLTVALDLLGDDSLRAVYADEMIRAEDGELSALLRPDFNLDLLL SMPASMVRNWLYRREIFVAAGGLDPALTDAAELDLLLRLIDAGGLDGLGHVHEPLLVSPTSRVWSHPSEQQALLRHLHHR SYAQAKIHSHLPGCYRIEYGHAHTPGVSIIVPTKNQLGMLQRCVETLLEKTAYSNYELLIVDNGSTDADACQWLDGIEAM DSPQLRVLRYPHPFNYAAMNNLAAQHARGEYLVLLNNDTAILQENWLDALLNHAQRPEVGVVGAKLLYPNGTVQHAGVVL GLRGPAEHPFNGQALDAPGYMYRLQVDQNYSAVTGACMMVRASLYAEVGGLDEDVFKVSYNDVDLCLKIRQAGYLVVWTP HAVLLHEGSVSQTQVDTAPQLAKVQRFEAEQEAMYRKWLPWIANDPAYNRNLNLNGDAFQVEDNNSLTWRPLRWRPLPTV LAMTADQTGCGNYRIIQPVHAMQAAGLADAIWSLRYLSPVEMQRLQPETLVLQRQMFDYNLEPQQRGTRFSNCFKVAELD DYLPNVPRKSLHRDAIPNDIMRSMRRSLAMVDRFVVSTPALAEALHGLHRDTRVVENRLPLPWWRDRQGQRRQGKRPRVG WGGGGGHQGDLEMIEEVIKALATEVEWVFFGMCPESLQPYVHEFHPGVPIDLYPAKLAGLNLDLALAPLEDNLFNQCKSN LRLLEYGACGFPVVCSDVRPYQGSLPVTRVRPRYRDWVEAIRMHTHDLDAAAAAGDALRAAVHRDWMLDQDHAAHWLTQW LPD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fgtA | AAK15339.1 | flagellar glycosyl transferase | Virulence | Not named | Protein | 2e-145 | 45 |
