Gene Information

Name : glnA (XCC0185)
Accession : NP_635580.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 241534 - 242943 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGTGGAAAATGTTGAAAAGCTGATCAAGGACAACAAGGTCGAGTTTGTCGACCTGCGCTTCGTCGATATGCGTGG
CGTGCAGCAGCACATCACCTTTCCGGCCAGCATCATCGAGCCGGCGTTGTTCGAAGAAGGCAAGATGTTCGACGGCAGCT
CCATCGCGGGTTGGAAGGGCATCAACGAGTCGGACATGGTCCTGCTCCCGGACGCGGGCACCGCTTACCTGGATCCGTTC
TTCGCCGATCCGACCATCGTGCTGACCTGCGACATCCTCGACCCGGCCACCATGCAGAGCTACGAGCGCGATCCGCGCGG
CATTGCAAAGCGTGCCGAGGCCTATCTGAAGTCGTCCGGCACCGCCGATCAGGCGTTCTTTGGCCCGGAGCCGGAATTCT
TCATCTTCGATTCGGTGCGCTTCGCCAATGACATGGGCCACACCTTCTTCCAGGTGGGTTCGGAAGAGGCGGCCTGGAAC
ACCGGCGCCAAGTACGACGGCGGCAACAGCGGTTACCGTCCCGGCGTGAAGGGTGGCTACTTCCCGGTGCCGCCGACCGA
CACCCTGCATGACCTCCGTGCGGAAATGATCAAGACGCTGGAGCAGGTCGGCATCGAGACCGAGGTGCACCACCACGAGG
TGGCGACCGCCGGCCAGTGCGAGATCGGCACCAAGTTCAGCTCGCTGGTGCAAAAAGCCGACGAACTGCTGACGATGAAG
TACATCATCAAGAACGTCGCCTACCGCAACGGCAAGACCGCCACCTTCATGCCGAAGCCGATCGTCGGCGACAACGGCTC
GGGCATGCACGTGCACCAGTCGCTGACCAAGGGCGGCGTGAACCTGTTCTCCGGCGACGGCTACGGCGGCCTGTCGCAGA
TGGCGCTGTGGTACATCGGCGGCATCTTCAAGCACGCCCGCGCCATCAATGCCTTCGCCAACTCCGGTACCAACAGCTAC
AAGCGTTTGGTTCCTGGTTACGAAGCTCCGGTGATGCTGGCCTATTCGGCGCGTAACCGATCGGCCTCGTGCCGCATTCC
GTGGGTGACCAACCCGAAGGCGCGCCGCATCGAAATGCGCTTCCCCGATCCGTTGCAGTCCGGCTACCTGACCTTCACCG
CGCTGATGATGGCCGGCCTGGACGGCATCAAGAACCAGATCGACCCGGGCGCACCGAGCGACAAGGATCTGTACGACCTG
CCGCCGGAAGAAGAGAAGCTGATCCCGCAGGTCTGCTCCAGCCTGGACCAGGCCCTGGAGGCGCTGGACAAGGATCGCGA
GTTCCTCAAGGCCGGCGGCGTGATGAGCGACGACTTCATCGACGGCTACATCGCATTGAAGATGCAGGAAGTCACCAAGT
TCCGCGCCGCAACGCATCCGCTGGAGTACCAGCTGTACTACGGCAACTGA

Protein sequence :
MSVENVEKLIKDNKVEFVDLRFVDMRGVQQHITFPASIIEPALFEEGKMFDGSSIAGWKGINESDMVLLPDAGTAYLDPF
FADPTIVLTCDILDPATMQSYERDPRGIAKRAEAYLKSSGTADQAFFGPEPEFFIFDSVRFANDMGHTFFQVGSEEAAWN
TGAKYDGGNSGYRPGVKGGYFPVPPTDTLHDLRAEMIKTLEQVGIETEVHHHEVATAGQCEIGTKFSSLVQKADELLTMK
YIIKNVAYRNGKTATFMPKPIVGDNGSGMHVHQSLTKGGVNLFSGDGYGGLSQMALWYIGGIFKHARAINAFANSGTNSY
KRLVPGYEAPVMLAYSARNRSASCRIPWVTNPKARRIEMRFPDPLQSGYLTFTALMMAGLDGIKNQIDPGAPSDKDLYDL
PPEEEKLIPQVCSSLDQALEALDKDREFLKAGGVMSDDFIDGYIALKMQEVTKFRAATHPLEYQLYYGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-106 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA NP_635580.1 glutamine synthetase VFG1399 Protein 2e-109 52