Gene Information

Name : xylA (XCC1758)
Accession : NP_637125.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 2043895 - 2045235 bp
Length : 1341 bp
Strand : +
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGAGCAACACCGTTTTCATCGGCGCGAAAGAATACTTCCCCGGCATCGGCAAGATCGGCTTCGAAGGCCGCGATTCGGA
CAACCCGCTCGCATTCAAGGTGTACGACGCCAACAAGCAGGTCGCCGGCAAGTCCATGGCCGAACACCTGCGCTTTGCGG
TGGCCTACTGGCACAGCTTCTGCGGCAATGGCGCCGATCCGTTCGGCCCGGGCACGCGTGCGTATCCGTGGGACGTAGGC
AACACCGCGCTGGCGCGTGCCGAAGCCAAGTCCGATGCCGCGTTCGAATTCTTCACCAAGCTCGGCGTGCCGTATTACTG
CTTTCACGACATCGACCTGGCGCCGGATGCGGACGACATCGGCGAGTACGAAAACAACCTCAAGCACATGGTGCGCATTG
CCAAGCAGCGCCAGGCCGACACCGGCGTCAAGCTGCTGTGGGGCACCGCCAATCTGTTCTCGCACCCGCGCTACATGAAT
GGTGCCTCCACTAATCCGGACTTCAACGTCGTGGCGCGCGCCGCGGTGCAGGTCAAGGCGGCGATCGATGCCACGGTGGA
GCTGGGCGGGGAAAACTACGTGTTCTGGGGCGGTCGCGAAGGCTACGCCTGCCTGCACAACACGCAAATGAAGCGCGAGC
AGGACAACATGGCGCGCTTCCTGACCCTGGCGCGCGACTACGGGCGTGCGATTGGCTTTACCGGCAACTTCCTGATCGAG
CCCAAGCCCATGGAGCCGATGAAGCACCAGTACGACTTCGACAGCGCCACGGTGATCGGCTTCCTGCACCAGCACGGCCT
GGACCAGGATTTCAAGCTCAATATCGAAGCCAACCACGCCACGCTGTCGGGCCACAGCTTCGAGCACGACCTGCAGGTGG
CCAGCGATGCCGGCCTGCTCGGCAGCATCGATGCCAACCGCGGCAACCCGCAGAACGGCTGGGATACCGACCAGTTCCCA
ACCGACCTGTACGACACCGTCGGCGCGATGCTGGTGGTGCTGCGTCAGGGCGGGCTGGCACCGGGCGGGCTGAACTTCGA
TGCCAAGGTGCGGCGTGAATCGTCCGACCCGCAGGACCTGTTCCTGGCCCACATCGGCGGCATGGACGCGTTCGCACGCG
GGCTGGAAGTGGCCGACGCGCTGCTGACCTCTTCGCCCCTGGAAACCTGGCGCGCGCAGCGTTACGCCAGCTTCGACAGC
GGCGCGGGCGCGGACTTTGCCAACGGCACCAGCACGCTGGCGGACCTGGCCAAGTACGCCGCCGGCAGGGGCGAGCCGAC
GCAAGTCAGCGGCCGCCAGGAGGCCTACGAGAACCTGATCAATCAGTACCTGACGCGTTGA

Protein sequence :
MSNTVFIGAKEYFPGIGKIGFEGRDSDNPLAFKVYDANKQVAGKSMAEHLRFAVAYWHSFCGNGADPFGPGTRAYPWDVG
NTALARAEAKSDAAFEFFTKLGVPYYCFHDIDLAPDADDIGEYENNLKHMVRIAKQRQADTGVKLLWGTANLFSHPRYMN
GASTNPDFNVVARAAVQVKAAIDATVELGGENYVFWGGREGYACLHNTQMKREQDNMARFLTLARDYGRAIGFTGNFLIE
PKPMEPMKHQYDFDSATVIGFLHQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFP
TDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVADALLTSSPLETWRAQRYASFDS
GAGADFANGTSTLADLAKYAAGRGEPTQVSGRQEAYENLINQYLTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 5e-104 52
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-104 52