Gene Information

Name : XCC1606 (XCC1606)
Accession : NP_636976.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Unknown
Product : ISxcc1 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1876374 - 1876640 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGCGCAAGAGCAAGTTCACCGAGAGCCAGATCGTCGCCACGCTGAAGCAGGTCGAGGGCGGTCGCCAGGTCAAGGATGT
CTGTCGCGAGCTGGGCATTTCCGATGCGACGTACTACGTCTGGAAGTCCAAGTACGGCGGCATGGAGGCCGCTGACGTGC
AACGCCTCCGCGACCTGGAGACTGAGCACAACAAGCTCAAACGTATGTACGCCGATCTCGCGATGGAAAACCATGCATTG
AAGGATGTCATCGCAAAAAAGCTGTAG

Protein sequence :
MRKSKFTESQIVATLKQVEGGRQVKDVCRELGISDATYYVWKSKYGGMEAADVQRLRDLETEHNKLKRMYADLAMENHAL
KDVIAKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-26 66
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 8e-21 52
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 5e-21 52
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-17 49
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-17 49
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 3e-17 47
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-17 47