Gene Information

Name : mutS (XCC1207)
Accession : NP_636581.1
Strain : Xanthomonas campestris ATCC 33913
Genome accession: NC_003902
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 1410066 - 1412741 bp
Length : 2676 bp
Strand : -
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
TTGCGACCCATCGACCGCCAGATTTATCGACCGCCAGATTTCCGGACAACGTTCTTGCAAACCGCCGACACCAAAGACAA
AACCAAACTCAGCACGGGCGCCGCCGAGCACACCCCGCTGATGAAGCAATTCTTCGCAGCCAAGTCGGACTACCCCGACC
TGCTGCTGTTCTTCCGCATGGGAGACTTCTACGAGCTGTTCTACGACGATGCGCGCAAGGCCGCGCGTCTGCTGGATATC
ACGCTGACCCAGCGCGGCAGTTCCGGCGGTGCGCCGATTCCGATGGCTGGCGTGCCGGTGCATGCCTACGAGGGCTATCT
GGCGCGCTTGGTGGCGTTGGGCGAGTCGGTGGCGATCTGCGAGCAGATCGGCGATCCGGCACTGGCCAAGGGCCTGGTCG
AGCGCAAGGTGGTGCGCATCGTCACCCCGGGCACGGTCACCGACGAGGCGTTGCTGGACGAGCGCCGCGACACGCTGTTG
ATGGCGATCTCGCGCAGCAAGCAAGGCTATGGCCTGGCCTGGGCCGATCTGGCCGGCGGGCGTTTCCTGGTCAATGAAGT
GGACAGCGTCGATGCGCTGGAAGCGGAAATCGCGCGCCTGGAACCGGCCGAGCTATTGGTGCCCGACGAAGACAACTGGC
CGGAATTCCTGCGTGGACGCGTCGGCGTGCGGCGCCGGCCACCATGGCTGTTCGACGCCGATAGCGGCCGGCGTCAGCTG
TTGGCGTTCTTCAAATTGCACGACCTGTCCGGCTTCGGCATCGACGACAAGCCCTGCGCCACCGCAGCGGCCGGCGCGCT
GCTCGGCTATGTCGAAGAAACCCAGAAACAGCGCTTGCCGCATCTGACCTCCATCGCGATGGAAGTGGCCAGCGAGGCGA
TCTCGATGAACGCAGCCACACGCCGGCATCTGGAGCTGGACACGCGCGTGGATGGCGATACCCGCAACACCTTGCTCGGC
GTGCTGGACAGCACGGTCACGCCGATGGGCGGGCGCCTGCTGCGCCGCTGGCTGCATCGCCCGTTGCGTCTGCGCGAGGT
ACTGGTGCAGCGCCACCACGCGGTCGGCAGCCTGATCGACACCGGCGCCGATACCGACGTGCGCGAGGCCTTCCGCGCGC
TGGGCGATCTGGAGCGCATCCTCACCCGCGTGGCGCTGCGCTCGGCGCGCCCGCGCGATTTCTCCACCTTGCGCGATGGC
CTGGCGCTGCTGCCGAAAGTGCGCACGATCCTCGCGCCACTGGATTCGCCGCGCCTGCAGACGCTTTATGCCGAACTCGG
CGAGCACGATGCCACCGCGCATCTGTTGATCAGCGCAGTGGCCGAACAACCGCCGCTCAAATTCAGCGACGGTGGCGTCA
TCGCCACCGGTTACGACGCCGATCTGGATGAGCTGCGCCGCCTGTCCACCAACGCCGACCAATTCCTGATCGACCTGGAA
CAACGCGAACGCGCCAGCAGCGGCATCGCCACGCTCAAGGTCGGCTACAACCGAGTGCACGGCTACTACATCGAGATCAG
CAAGGGCCAAGCCGAGAAAGCCCCGCTGCACTACAGCCGCCGACAGACGCTGACCAACGCCGAGCGCTACATCACCGAAG
AACTCAAGAGCTTCGAAGACAAGGTGCTATCGGCGCGCGAGCGCTCGTTGTCGCGCGAAAAACTGCTCTACGAAGGCCTG
CTCGACGCACTCGGCGGCGAGCTGGAAGGCCTCAAGCGCTGCGCCAGTGCATTGAGCGAACTGGATGTGTTGGCCGGGTT
CGCCGAACGGGCCCAGGCGCTGGATTGGTCGCAACCCGAACTGGAAAGCGCGCCGTGTCTGCACATCGAACGCGGCCGCC
ACCCGGTGGTGGAAGCCGTGCGCGACCAGCCATTCGAACCCAACGATCTGGACCTGCACCCGGACCGCCGCATGCTGGTC
ATCACCGGCCCGAACATGGGCGGTAAATCGACCTACATGCGGCAGAACGCGTTGATCGTGTTGCTGGCGCATATCGGCAG
CTATGTACCGGCCAGCCGCGCGGTGATCGGGCCGATCGACCGCATCCTCACCCGCATCGGCGCCGGCGACGACCTGGCGC
GCGGGCAATCCACCTTCATGGTGGAAATGGCCGAGACCAGCTACATCCTGCATCACGCCACGCCGCAATCGCTGGTGCTG
ATGGACGAGATCGGCCGCGGCACCTCCACCTACGATGGCCTGGCCTTGGCCGATGCGGTGGCGCGTCATCTGGCCCACAC
CAATCGCTGCTACACGCTGTTTGCCACGCATTATTTCGAGCTCACCGCGCTGGCGGATGCCTCGCATGCCGGTGGCGGCA
GCGGCATCGCCAACGTGCATCTGGATGCGGTGGAACACGGCGAGCGCCTGGTGTTCATGCATGCGGTCAAGGACGGCCCG
GCCAATCGCAGCTTCGGCTTGCAGGTGGCCGCGCTGGCCGGCCTGCCGAAGGCGGCGGTGCAGCAGGCACGCCGCCGGCT
GGCCGAACTGGAGCAACGCGGCGGCGACAGCCACGCTGCCGAGATGGCACCCGCCGCGCTGGATGCACCGCAGCAATTCG
GCCTGTTCACCGCGCCGTCTTCGGCCGCGCAGGAAGCCTTGCAGGCGCTGGATCCGGACGAACTGACGCCCAAGCAGGCA
CTGGAAGCGCTGTACCGGCTCAAGGCGCTGCTCTGA

Protein sequence :
MRPIDRQIYRPPDFRTTFLQTADTKDKTKLSTGAAEHTPLMKQFFAAKSDYPDLLLFFRMGDFYELFYDDARKAARLLDI
TLTQRGSSGGAPIPMAGVPVHAYEGYLARLVALGESVAICEQIGDPALAKGLVERKVVRIVTPGTVTDEALLDERRDTLL
MAISRSKQGYGLAWADLAGGRFLVNEVDSVDALEAEIARLEPAELLVPDEDNWPEFLRGRVGVRRRPPWLFDADSGRRQL
LAFFKLHDLSGFGIDDKPCATAAAGALLGYVEETQKQRLPHLTSIAMEVASEAISMNAATRRHLELDTRVDGDTRNTLLG
VLDSTVTPMGGRLLRRWLHRPLRLREVLVQRHHAVGSLIDTGADTDVREAFRALGDLERILTRVALRSARPRDFSTLRDG
LALLPKVRTILAPLDSPRLQTLYAELGEHDATAHLLISAVAEQPPLKFSDGGVIATGYDADLDELRRLSTNADQFLIDLE
QRERASSGIATLKVGYNRVHGYYIEISKGQAEKAPLHYSRRQTLTNAERYITEELKSFEDKVLSARERSLSREKLLYEGL
LDALGGELEGLKRCASALSELDVLAGFAERAQALDWSQPELESAPCLHIERGRHPVVEAVRDQPFEPNDLDLHPDRRMLV
ITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGPIDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVL
MDEIGRGTSTYDGLALADAVARHLAHTNRCYTLFATHYFELTALADASHAGGGSGIANVHLDAVEHGERLVFMHAVKDGP
ANRSFGLQVAALAGLPKAAVQQARRRLAELEQRGGDSHAAEMAPAALDAPQQFGLFTAPSSAAQEALQALDPDELTPKQA
LEALYRLKALL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS NP_636581.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 55