Gene Information

Name : MM_0953 (MM_0953)
Accession : NP_632977.1
Strain : Methanosarcina mazei Go1
Genome accession: NC_003901
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1130422 - 1131126 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence :
GTGAACATTAATGAAAATAGTTTACCTGATGATAAGTCGCCTATAGTTGAGGTTTCTAACGTCAGGAAAAGTTATATGCT
TGGGAAGATGGAAGTCCCTGTACTTTCAAATATTTCCCTTCGAATCGAAAAAGGAGAATTTCTCGCGATTGTAGGCCCTT
CAGGTTCTGGAAAAAGCACTCTTATGAACCTTATAGGCTGCCTTGATAGGCCTACTGAAGGTCAGGTCCTTATAAAAGGA
AGAGATCTGGATGGGATGTCCGATGAAGAGCTTGCCCGCCTCCGGGGGCTTGAAATAGGTTTTGTTTTTCAAACATTCAA
TCTGGTCCCTCGATTGACCGCTTTCGAGAATGTTTTGCTTCCTACTTTTGCTAATTCAAGGAGCACAGATCCGCAAAAGC
GTGCAAAGGAACTTCTCAGTATTATGGGACTGAAGGACCGCATGCGCCACAGGCCTGGAGAGCTTTCTGGGGGTCAATCG
CAGAGAGTCTCAATTGCAAGGGCACTCATCAATGATCCTTCAATTCTTCTTGCGGATGAACCGACTGGAAACCTGGACTC
GAAAACAGGCTTTGAAATCCTTAACATATTTATGGATTTAAATAAGGACGGAAGGACAGTCGTAATAGTTACACACGACC
CCGAGATCGCAAAATTTGCTGATAGGGTCATCCTGGTAAAAGATGGAACAATTCAATATAATTAA

Protein sequence :
MNINENSLPDDKSPIVEVSNVRKSYMLGKMEVPVLSNISLRIEKGEFLAIVGPSGSGKSTLMNLIGCLDRPTEGQVLIKG
RDLDGMSDEELARLRGLEIGFVFQTFNLVPRLTAFENVLLPTFANSRSTDPQKRAKELLSIMGLKDRMRHRPGELSGGQS
QRVSIARALINDPSILLADEPTGNLDSKTGFEILNIFMDLNKDGRTVVIVTHDPEIAKFADRVILVKDGTIQYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 42
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MM_0953 NP_632977.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-52 52
MM_0953 NP_632977.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-41 50
MM_0953 NP_632977.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-43 47
MM_0953 NP_632977.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-43 46
MM_0953 NP_632977.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 9e-36 42