Gene Information

Name : MM_2894 (MM_2894)
Accession : NP_634918.1
Strain : Methanosarcina mazei Go1
Genome accession: NC_003901
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3476716 - 3477429 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAAATACATTGATTGCCTTCCAGAATGTCTGGAAAACTTATCAGATGGGAGAAGTTCAGGTCAATGCTTTGAAAAA
TGTGAGCGTGAAGCTTGGAAGAGGGGAATTTGCCGCAATAATCGGGCCCTCAGGAAGCGGGAAGTCTACAATGATGAACC
TGGTTGGCTGTCTTGATATCCCTTCAAAGGGCAAAATTTTCCTGAAAGGCAGGGATATATCCCTGCTTCAGGAATCTGAC
CTTGCCGCCCTCAGAGGCAGGACAATAGGATTTGTTTTCCAGCAGTACAACCTGATTCCCGGGATGACGGCTCTTGAGAA
CGTTCTTCTGCCCCTTGAAATCCAGGAAATGGATGACAGAATTGCGGAAAAAAAAGCAAAGGAACTTCTTAACCTCGTGG
GGCTCTCGGACAAGATGCAGAATAAGCCTTCACAGCTTTCAGGAGGGCAGCAGCAGAGAGTTTCTATTGCAAGAGCACTT
GCCTGCGATCCCGAAATAATCCTTGCTGACGAGCCGACAGGTGCGCTTGACAGCATAACCGGTCAGGAAGTGATTTCAAT
CCTTTACAGGCTCTGGAAGGAAAAAAACAAAACAGTAGTTATGGTCACACACGACCTGCACCTTGCACAGTATGCCAGAA
GGCACATTCAGCTCAAGGACGGAGAGATGGTCAGGGACAGCCCTAACAAAGAACAGATCAGCCCTGAAACCTGA

Protein sequence : 
MENTLIAFQNVWKTYQMGEVQVNALKNVSVKLGRGEFAAIIGPSGSGKSTMMNLVGCLDIPSKGKIFLKGRDISLLQESD
LAALRGRTIGFVFQQYNLIPGMTALENVLLPLEIQEMDDRIAEKKAKELLNLVGLSDKMQNKPSQLSGGQQQRVSIARAL
ACDPEIILADEPTGALDSITGQEVISILYRLWKEKNKTVVMVTHDLHLAQYARRHIQLKDGEMVRDSPNKEQISPET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-30 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MM_2894 NP_634918.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-48 48
MM_2894 NP_634918.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-44 47
MM_2894 NP_634918.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-40 43
MM_2894 NP_634918.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-35 43
MM_2894 NP_634918.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-33 42