Gene Information

Name : MM_2685 (MM_2685)
Accession : NP_634709.1
Strain : Methanosarcina mazei Go1
Genome accession: NC_003901
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 3209616 - 3210203 bp
Length : 588 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAATGAAGGTTTTCCTGTGAAAAAGACGCTTGAAGAATTCGATTTTGAGTTTCAGTTATCTATTGATAAAAAAGT
CATAGAAGACCTTGCAACCTTGAGATTTGTTCATAATGCAGAAAACGTTGTTTTGCTCGGTCCTCCTGGCGTTGGAAAGT
CGCATCTTGCAATTGCTCTTGGAATTGAAGCGGTAAAAGCAGGAATTTCGGTTTACTTTACCAATACAGGAAACCTTATT
GAAAGATTGAAATTAGCAAATAGAGAAGGAATGCTTGAAAAGAAACTCAGAGACTTGATGAAGTATAAAGTGCTGATGAT
CGATGAAATAGGATATCTCCCATTTGACGAAGAAGGAGCTCACTGCTTATTTCAGCTAATCTCCAGACGTTATGAAAAGT
GTTCAACAATCCTGACATCGAATAAGTCATATGGAGAATGGGGAGAGATATTCAAGGACCATGTAATAGCGGCTGCCTTG
CTTGATCGGATACTCCATCATTGTACTACTATTAACATCAAAGGGGAAAGTTACAGGCTGAAAGAAAGGAAAAAACAGGG
TATAAAAACGGTAAATATCTATCAGTAA

Protein sequence :
MKNEGFPVKKTLEEFDFEFQLSIDKKVIEDLATLRFVHNAENVVLLGPPGVGKSHLAIALGIEAVKAGISVYFTNTGNLI
ERLKLANREGMLEKKLRDLMKYKVLMIDEIGYLPFDEEGAHCLFQLISRRYEKCSTILTSNKSYGEWGEIFKDHVIAAAL
LDRILHHCTTINIKGESYRLKERKKQGIKTVNIYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 5e-42 50
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-46 50
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-46 50
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-46 50
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-46 50
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-46 50
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 4e-46 50
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-46 50
unnamed CAA21402.1 - Not tested HPI Protein 4e-46 50
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 4e-46 50
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 4e-46 50
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 3e-46 50
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-45 49
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 5e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MM_2685 NP_634709.1 transposase VFG1460 Protein 2e-42 50
MM_2685 NP_634709.1 transposase VFG1627 Protein 1e-46 50
MM_2685 NP_634709.1 transposase VFG1606 Protein 1e-46 50
MM_2685 NP_634709.1 transposase VFG1515 Protein 1e-46 50
MM_2685 NP_634709.1 transposase VFG1663 Protein 8e-46 49