Gene Information

Name : MM_2432 (MM_2432)
Accession : NP_634456.1
Strain : Methanosarcina mazei Go1
Genome accession: NC_003901
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2901968 - 2902873 bp
Length : 906 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGACATTCATGGAATTTGAAAAATTGAGACATGGAACCGAACTTATCAAGCGGGGCTTTGCACGGATGCAGAAAGGGGG
TGTGATCATGGACGTTACAACCCCCGAACAGGCCAGGATCGCAGAAGAAGCCGGAGCAGTTGCTGTTATGGCCCTTCAGG
CCGTCCCTGCAGATCTCAGAAAAGCAGGAGGGGTTGCACGTATGGCAGACCCCGAAATTGTCCAGCAGATTATTGATACG
GTTACCATTCCTGTTATGGCAAAGGCAAGGATCGGGCACTTTGTAGAAGCCGAAATTTTAGAGGCACTTGGCGTTGACAT
GGTAGATGAGTCCGAAGTCCTTACTCCTGCCGACCCCTTCTACCACATAGACAAAACACAGTTTACAGTGCCTTTTGTCT
GCGGGGCAAGAAACCTTGGAGAAGCCCTCCGCAGGATTAACGAAGGTGCAGCCATGATCCGGACCAAAGGAGAAGCCGGA
ACAGGCGACGTCAGCCAGGCAGTAAAGCACATGAAGCAGATCCAGGGAGAAATCCGCGCCCTTGCAGGCAAGACCAAAGA
AGAGCTTATAATGGTCGCAAGAGAGATTGAAGCTCCTATCGAACTCGTGGTCGAAACCGCAAAAATGCAGCGCCTGCCTG
TGGTGAACTTTGCAGCCGGTGGAGTTGCAACCCCTGCCGACGCAGCTCTCATGATGCGCCTTGGTGCAGACGGAGTCTTT
GTCGGTTCAGGTATTTTCAAAGCCGAAAATCCGGAAAAGATGGCAAAAGCAGTTGTTGAAGCCGTCAATAACTACGATAA
CCCTGCAAAACTTGCAGAAATCTCAAAAGGCGTGGGTGCAGGAATGAAAGGCATCAGCGCAGACATGATCCCTGTGCAGG
AAGCCCTTCAGGAACGCGGCTGGTAA

Protein sequence :
MTFMEFEKLRHGTELIKRGFARMQKGGVIMDVTTPEQARIAEEAGAVAVMALQAVPADLRKAGGVARMADPEIVQQIIDT
VTIPVMAKARIGHFVEAEILEALGVDMVDESEVLTPADPFYHIDKTQFTVPFVCGARNLGEALRRINEGAAMIRTKGEAG
TGDVSQAVKHMKQIQGEIRALAGKTKEELIMVAREIEAPIELVVETAKMQRLPVVNFAAGGVATPADAALMMRLGADGVF
VGSGIFKAENPEKMAKAVVEAVNNYDNPAKLAEISKGVGAGMKGISADMIPVQEALQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 3e-82 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-82 66
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-82 65