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Name : MM_2198 (MM_2198) Accession : NP_634222.1 Strain : Methanosarcina mazei Go1 Genome accession: NC_003901 Putative virulence/resistance : Unknown Product : type I restriction-modification system specificity subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 2611111 - 2612628 bp Length : 1518 bp Strand : + Note : - DNA sequence : ATGAGTGATTTTGAAAAGCAATTGTGGAAAGCGGCAGACAAACTCCGAAAAAATATTGATGCTGCTGAGTATAAGCACAT AGTTTTGGGCTTGATTTTTCTAAGATACATCTCAGATGCCTTTGAGGAATTATATGAAAAATTGCAACAGGGGGAAGGGG AGTACGCCGGTGCAGACCCTGAAGACAGGGATGAATACAAAGCGGAGAATGTCTTTTTTGTCCCTGCAATTTCCCGCTGG CCATATCTGCAATCAGAAGCCAAAAAACCGGATATCGGTAAATCTGTTGATAATGCAATGGATGCCATCGAAAAAGAGAA TCCTCTGCTTAGAGGGGTTTTACCAAAGGTATTTGCACGGGGCAATCTTGACCCTACAAATCTTGGCGGTCTGATTGATC TGGTGAGCAATGTTGCTCTTGGAGATGCCAAAAGCAGAAGTGCTGATGTTCTCGGTCATGTCTTCGAATATTTCCTTGGT GAATTTGCTCTGGCAGAAGGAAAAAAGGGTGGACAGTTCTACACTCCGAGAAGCGTTGTTGAGTTACTGGTAGAGATGCT GGAGCCCTACAATGGCCGGGTCTTTGACCCATGCTGCGGTTCCGGTGGCATGTTTGTGCAGTCAGAGAAGTTTGTTGCTG ACCATCAGGGAAAAATAAACGATATATCGATCTACGGGCAGGAGAGCAATCAGACAACGTGGCGGTTGGCAAAGATGAAT CTCGCCATCAGAAGCATTGACAGTTCCCAGGTTAAATGGAACAATGAAGGCTCTTTCCTCAATGATGTCCATAAAGACCT GAAAGCGGATTATGTCATAGCCAATCCGCCGTTCAATGACAGCGACTGGAGTGGCGACCTGTTACGCAAGGACGGCAGGT GGAAGTATGGTGTTCCTCCAGCCGGAAACGCTAATTATGCCTGGATACAGCATTTCCTTTATCATTTAGGTCCGAGCGGT CAGGCCGGTTTTGTTCTGGCTAAGGGTTCTCTGACATCCAAATCATCGGGTGAGGGGGACATCAGAAAAGAGCTCGTAGA GGCACGCCTGGTAGACTGCATAGTGAACCTTCCGCCAAAACTGTTCCTGAATACCCAGATCCCGGCAAGCCTCTGGTTCC TGAGCAGGAATAAAGCCAACGGTAAGCACAGAAACAGGACTGATGAGATTCTGTTCATCGATGCACGGAACATGGGACAC CTGATAAACCGCAGAACCCGTGAATTTTCACCTGAGGATATACAGCAGATTGCGGGCACCTACCATAAATGGCGCAATCC GGAAGGGAATTACGAAGATGTGAAAGGATTCTGCAATTCCGCTCCAATTGAACGGGTACGTGAACTGGGCTATGTACTGA CTCCGGGGCGCTATGTAGGATTGCCGGACGATGAAGATAATTTTGATTTCAATGAGCGCTTCTCCGCGCTGAAAGCCGAG TTCGAGGAGCAGTTGAAAGAGGAAGAGAGACTGAACCTGCGGATCGCCGAGAATCTGAAAAAGGTGAAGCCGGCATGA Protein sequence : MSDFEKQLWKAADKLRKNIDAAEYKHIVLGLIFLRYISDAFEELYEKLQQGEGEYAGADPEDRDEYKAENVFFVPAISRW PYLQSEAKKPDIGKSVDNAMDAIEKENPLLRGVLPKVFARGNLDPTNLGGLIDLVSNVALGDAKSRSADVLGHVFEYFLG EFALAEGKKGGQFYTPRSVVELLVEMLEPYNGRVFDPCCGSGGMFVQSEKFVADHQGKINDISIYGQESNQTTWRLAKMN LAIRSIDSSQVKWNNEGSFLNDVHKDLKADYVIANPPFNDSDWSGDLLRKDGRWKYGVPPAGNANYAWIQHFLYHLGPSG QAGFVLAKGSLTSKSSGEGDIRKELVEARLVDCIVNLPPKLFLNTQIPASLWFLSRNKANGKHRNRTDEILFIDARNMGH LINRRTREFSPEDIQQIAGTYHKWRNPEGNYEDVKGFCNSAPIERVRELGYVLTPGRYVGLPDDEDNFDFNERFSALKAE FEEQLKEEERLNLRIAENLKKVKPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 4e-139 | 60 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 1e-137 | 59 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 3e-139 | 59 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-107 | 46 |
