Gene Information

Name : SC5E9.30 (SCO7782)
Accession : NP_631813.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Unknown
Product : IS110 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 8609130 - 8610347 bp
Length : 1218 bp
Strand : +
Note : SC5E9.30, probable IS110 transposase, len: 405aa; identical to SW:P19780 (YIS1_STRCO) insertion element IS110 hypothetical 43.6 kDa protein from Streptomyces coelicolor. Contains Pfam match to entry PF01548 Transposase_9, Transposase.

DNA sequence : 
ATGTTCGACACCGAAGACGTGGGCGTGTTCCTCGGCCTGGACGTCGGCAAGACCGCTCACCACGGCCACGGACTCACCCC
GGCCGGGAAGAAGGTCCTCGACAAGCAGCTGCCCAACAGCGAGCCGAGACTGCGGGCCGTCTTCGACAAGCTGGCCGCGA
AGTTCGGCACGGTCCTGGTGATCGTGGACCAGCCCGCTTCCATCGGCGCCCTCCCGCTCACGGTCGCCCGGGACGCCGGC
TGCAAGGTCGCCTACCTGCCCGGCCTGGCGATGCGGCGGATCGCCGACCTGTATCCCGGCGAGGCCAAGACCGACGCGAA
GGACGCAGCGGTCATCGCGGACGCGGCCCGCACGATGGCGCACACCCTGCGTTCCCTGGAGCTCACCGACGAGATCACCG
CCGAGCTCTCGGTCCTCGTCGGCTTCGACCAGGACCTCGCGGCCGAGGCCACCCGCACCTCCAACCGGATACGCGGCCTG
CTCACCCAGTTCCACCCCTCGCTGGAGCGCGTCCTGGGCCCCCGCCTCGACCACCAGGCCGTCACTTGGCTGCTGGAGCG
CTACGGCTCTCCGGCCGCACTGCGCAAAGCCGGACGCCGCAGGCTCGTCGAGCTCGTCCGGCCCAAGGCCCCGCGCATGG
CCCAGCGGCTGATCGACGACATCTTCGACGCCCTGGACGAGCAGACCGTCGTGGTCCCGGGAACCGGCACCCTCGACATC
GTCGTGCCCTCCCTGGCCAGCTCTCTCACCGCTGTCCACGAACAGCGCCGGGCCCTGGAAGCCCAGATCAACGCCCTGCT
GGAGGCCCACCCTCTTTCCCCGGTCCTGACGTCGATGCCCGGCGTCGGCGTCAGGACCGCCGCCGTCCTGCTGGTCACCG
TCGGCGACGGCACCAGCTTCCCCACCGCCGCCCACCTGGCCTCCTACGCCGGACTCGCCCCGACCACGAAGTCGTCCGGT
ACCTCGATCCACGGCGAACACGCGCCCCGAGGCGGCAACCGCCAGCTCAAACGCGCCATGTTCCTGTCCGCCTTCGCCTG
CATGAACGCCGACCCCGCCTCCCGCACCTACTACGACCGCCAGCGAGCCCGCGGCAAAACCCACACCCAGGCCCTCCTCC
GCCTCGCCCGCCAACGCATCAGCGTCCTGTTCGCCATGCTCCGAGACGGCACCTTCTACGAATCCCGCATGCCCGCGGGC
GTCGAGCTCGCGGCATGA

Protein sequence : 
MFDTEDVGVFLGLDVGKTAHHGHGLTPAGKKVLDKQLPNSEPRLRAVFDKLAAKFGTVLVIVDQPASIGALPLTVARDAG
CKVAYLPGLAMRRIADLYPGEAKTDAKDAAVIADAARTMAHTLRSLELTDEITAELSVLVGFDQDLAAEATRTSNRIRGL
LTQFHPSLERVLGPRLDHQAVTWLLERYGSPAALRKAGRRRLVELVRPKAPRMAQRLIDDIFDALDEQTVVVPGTGTLDI
VVPSLASSLTAVHEQRRALEAQINALLEAHPLSPVLTSMPGVGVRTAAVLLVTVGDGTSFPTAAHLASYAGLAPTTKSSG
TSIHGEHAPRGGNRQLKRAMFLSAFACMNADPASRTYYDRQRARGKTHTQALLRLARQRISVLFAMLRDGTFYESRMPAG
VELAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 5e-92 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SC5E9.30 NP_631813.1 IS110 transposase VFG1494 Protein 3e-92 59