Gene Information

Name : SCF43A.08 (SCO0818)
Accession : NP_625118.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 867800 - 868594 bp
Length : 795 bp
Strand : +
Note : SCF43A.08, probable ABC transporter ATP-binding protein, len: 264 aa; similar to many hypothetical ABC transporter ATP-binding proteins e.g. TR:O28803 (EMBL:AE001001) Archaeoglobus fulgidus ABC transporter ATP-binding protein (226 aa), fasta scores; opt:

DNA sequence : 
GTGATGAGGATGTTTCGCTCCGGCGCACGAGGCAACCACGACCCGGGCCCCGCCTCCGAGGCCCTCCGGCTCGTCAAGGT
GACCCGGACGTACGGCTCGGCGGACAACGCAGTGACCGCTCTGGACGGGGTGACGCTGAGCCTGGGACGCGGCACGTTCA
CCGCGGTGATGGGGCCGTCCGGGTCGGGCAAGTCCACGCTGCTCCAGTGCGCGGCGGGCCTCGACCGGCCGGACAGCGGC
ATCGTGTGCGTGGACGGCAAGGAGCTGACGGGTGGCGGCGAGGCGGAGCTGACGAAGTTCCGGCGCGGCCGGGTCGGGTT
CGTCTTCCAGCAGTACAACCTGCTGGAGACGCTGACCGTCGCGCAGAACACGGTGCTGCCGCTCAAGCTGGCCGGGCGGC
GCGTCGACCGGAAGCGGGCGCGGGAGGTCCTGACGTCGGTCGGTCTCGGGGACCGGCTCGGCCACCGTCCCGACCAGCTC
TCCGGCGGTCAGCGGCAGCGGGTGGCGATCGCAAGGGCGCTGGTCACCGAACCGCGGGTGATCTTCGCGGACGAGCCGAC
GGGCGCCCTGGACACGCGCAGCGCCCGGCAGGTGCTGCTGCTGCTCCAGGAGGCGGCGCGGGTGCACGGGCGGACCGTGG
TGATGGTGACGCACGACCCGGTCGCCGCGTCGTACGCCGACTCGGTGGTCTTCCTCGCCGACGGCCGGCTGGCGGGGCGG
ATGGACGCGCCGACCCCGGACGCGGTCGCGGAGCGCCTCGCCCACCTGGGCGACGACGTGCCGGCGGGGGTGTGA

Protein sequence : 
MMRMFRSGARGNHDPGPASEALRLVKVTRTYGSADNAVTALDGVTLSLGRGTFTAVMGPSGSGKSTLLQCAAGLDRPDSG
IVCVDGKELTGGGEAELTKFRRGRVGFVFQQYNLLETLTVAQNTVLPLKLAGRRVDRKRAREVLTSVGLGDRLGHRPDQL
SGGQRQRVAIARALVTEPRVIFADEPTGALDTRSARQVLLLLQEAARVHGRTVVMVTHDPVAASYADSVVFLADGRLAGR
MDAPTPDAVAERLAHLGDDVPAGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-41 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-41 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-41 47
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCF43A.08 NP_625118.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-43 47
SCF43A.08 NP_625118.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-44 46
SCF43A.08 NP_625118.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-44 46
SCF43A.08 NP_625118.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-36 45