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Name : SC4C2.24 (SCO7689) Accession : NP_631728.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 8524521 - 8526347 bp Length : 1827 bp Strand : + Note : SC4C2.24, probable ABC transporter ATP-binding protein, len: 551 aa; similar to C-terminal region of SW:YD48_MYCTU (EMBL:Z75555) Mycobacterium tuberculosis hypothetical ABC transporter ATP-binding protein RV1348, 859 aa; fasta scores: opt: 1313 z-score: 1 DNA sequence : GTGGCCCGGACCCCGGCAGCCCGGACCCCGGCAGCCCGGACCCCGGCAGCCCCCGGCGCGGGCACCGGGTCACCCCCGCG CCCTCCGCGTCCCCTGTGCGAGCTGACCGGTCCCGTCCGGAGCCGACTGGCCGTCTCCGTCGGCCTCCAGACCGTCGCGG CCCTGGCCGGAGTGGTGCCTTTCATCGCCGTCTCCGAGATCGCCGGCCGACTCACGACGGGGACCCCCGCCGACGGTGAC ACCCTGTGGCCGCTGGTCGCGCTGGCCTGCGCGGCGGGGCTCCTCGCCCTGGCGTGCGGCACCGCGGCCGGCGCCCTCGC CCACATCGCCGACAACGACCTCCAGCTCGCCCTCCGCCGCCGGCTCGCCCGGCACGTCGGACGGCTGCCACTGGGCCGGC TCACCGACCGGGGCACCGGCGAGGTCAAGCAGGCGGTGCAGGACGACGTGAGCGCACTGCACACGCTGTTCGCCCACACC CTGCTCGACGTCGTCGCCGTACTCACCGCACCGGTGCTGGCCCTGGCCTACCTGTTCACCGTCGACTGGCGCCTGGCCCT GGTCAGCGTCGTCCCCCTGCTGCTCGGCGTGCTCCTGTTCAGCCGGGCGATGGCGGGCGCCGCTGCCCAGATGGCCGAGT TCGGCGCCGCGCTGGGGCGGATCTCCACCGCCGCCGTGGAGTTCGCCTCCGGCATCGCCGTCTTCAAGAGCTTCGGCCGG GGCCGCAAGGCCCACGAGCGTTTCGTCGACGCCACCGAGGGCTTCGCCGACTTCTTCTCCCGCTGGGTCCGCACCACCCT GGTCAGTTCCACCGCCGCCGTGCTGGTGGTCGCCCCGGCCGTGGTCTTGCTGCTCCTGACCGTGGTGGGCGCCGTGCTCG TCACCCAGGACTGGCTGACCGGCGCCGAACTCGTCCCCTTCCTGCTGCTGGGCCCCGCCGTCGCCGCCCCCATGGGCGTC GTGGGCCCCCGCATCCAGCAGATCCGGGCCGGCCAGGCCGCCGCCGTACGCATCACGCAGCTGCTGCACGCCCCGACCCT CCCCGAGCCCGCCACCCCCGTCCTGCCCGACGGCCACCACGTCCGCCTGCGCGGGGTCACCTTCTCCTACGACGGGCGCA CCGACGTCCTGCGCGACGTCGACCTCGATCTCGCGCCCGGCACGGTCACCGCCCTGGTCGGCCCCTCCGGCTCCGGCAAG TCCACCCTGGCCTCGCTCCTGCCCCGCTTCCACGACGTCACCGCCGGCACGGTGACCCTCGGCGGCGCCGACCTCCGCGA CATCCCCGCGACCGAGCTGTACCGGCGGGTCGGCTTCGTCCTCCAGGACGTACGGCTGCTGCGGGCGAGCGTCGCCGACA ACATCCGCCTGGGCCGCCCCGAGGCCACCGACGAGGAAGTCGAGCGGTGCGCCCGCGCCGCCCGCATCCACGACCGCGTC ACGGCACTGCCCGACGGCTACGCGACCGAACTCGGCACGGCCGTCACTCTCTCCGGCGGTGAGGCACAACGCCTCTCCAT CGCGAGAGCCCTGCTCGCCGACGCCCCGGTCCTCGTGCTCGACGAGGCGACCGCGTACGCCGACCCGCACTCCGAGGCAC TGATCCAGGACGCGCTGTCCGCGCTCGCGGCCGGCCGCACCCTGCTCGTCATCGCCCACCGGCTGTCGACCGTCCGCTCC GCCGACCGGATCGTGGTCCTGGAGGACGGACGCGTCACCGAACAGGGCCGCCACGACGACCTCGTCGCCGCGGGGGGCCG TTACGCCGCCCTCTGGGACGCCCAGAGCAGCAGCACGGACGACATCCGAGAAGGAAGTGCACGATGA Protein sequence : MARTPAARTPAARTPAAPGAGTGSPPRPPRPLCELTGPVRSRLAVSVGLQTVAALAGVVPFIAVSEIAGRLTTGTPADGD TLWPLVALACAAGLLALACGTAAGALAHIADNDLQLALRRRLARHVGRLPLGRLTDRGTGEVKQAVQDDVSALHTLFAHT LLDVVAVLTAPVLALAYLFTVDWRLALVSVVPLLLGVLLFSRAMAGAAAQMAEFGAALGRISTAAVEFASGIAVFKSFGR GRKAHERFVDATEGFADFFSRWVRTTLVSSTAAVLVVAPAVVLLLLTVVGAVLVTQDWLTGAELVPFLLLGPAVAAPMGV VGPRIQQIRAGQAAAVRITQLLHAPTLPEPATPVLPDGHHVRLRGVTFSYDGRTDVLRDVDLDLAPGTVTALVGPSGSGK STLASLLPRFHDVTAGTVTLGGADLRDIPATELYRRVGFVLQDVRLLRASVADNIRLGRPEATDEEVERCARAARIHDRV TALPDGYATELGTAVTLSGGEAQRLSIARALLADAPVLVLDEATAYADPHSEALIQDALSALAAGRTLLVIAHRLSTVRS ADRIVVLEDGRVTEQGRHDDLVAAGGRYAALWDAQSSSTDDIREGSAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDPW8_2175 | YP_005143723.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 2e-52 | 43 |
| irp2K | YP_005163491.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 7e-56 | 42 |
| irp2K | YP_005134503.1 | lipid A export ATP-binding/permease protein msbA | Not tested | Not named | Protein | 6e-56 | 42 |
