Gene Information

Name : SC10G8.28c (SCO7400)
Accession : NP_631450.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 8213273 - 8214151 bp
Length : 879 bp
Strand : -
Note : -

DNA sequence : 
GTGAGATCAGGTGAAGACGCAGCCGGTACCCCGCGCCTGCGCGGACACGAGCTTTCGGCCACGGGCGTGACCGTCGCGTA
CGACGGAGTCGATGTCGTGCACGACGCGGGGGTCAGGCTCAGGCCCGGCGAAGTGACCGTCCTGGTGGGCCCGAACGGCA
GTGGGAAGTCGACGCTGCTGCGGACCGTCGCCCGGCTGCAGCGGGCCCGCAGTGCCACGCTCAGCCTGGACGGCGCCACC
GACGGGCTGGCGCTGACGTCCCGTGAGTTCTCGCGGTACGTCGCCCTGCTGACGCAGGGCCGTCCGACGCCCGGCGGGCT
GACCGTGCGGGACGTCGTCGAGTTCGGCCGCTACCCGTACCGGGGCCGCTGGGGACGGCCCGATCCGGACGGCCCCGCCG
CCGTCGAGCGGGCGCTCGCGCTCACCGGCGTCGACGGCCTCGCCGACCGCGGCGCGGACCACCTCTCCGGCGGGCAGTTG
CAGCGGGTGTGGCTCGCGAGCTGTCTCGCCCAGGAGACCGGCGTACTGCTCCTGGACGAACCCACGACCTACCTGGACCT
GCGCTACCAGGTCGAACTCCTCGACCTGATCCGCGATCTGGCGGACGACCACGGCATCGCCGTCGGTGTCGTCCTGCACG
ACCTCGACCAGGCGGCGGCCGTCGCCGACCGGATCACGCTCCTCGAAGCGGGCCGGATCGTCGCCGACGGCCCGCCCGAG
GACGTGCTGACGCCGGAGCGGCTCACCGCCGTCTACGGCATCCGGATCGACGTCGACACCGACCCCCTGACCGGCCGGCT
GCGCACCCGCCCGATCGGCCGCCACCACATACGCACCCCCCGCACACGAACTCCCGAAAGGCTCGGCACCACCTCATGA

Protein sequence : 
MRSGEDAAGTPRLRGHELSATGVTVAYDGVDVVHDAGVRLRPGEVTVLVGPNGSGKSTLLRTVARLQRARSATLSLDGAT
DGLALTSREFSRYVALLTQGRPTPGGLTVRDVVEFGRYPYRGRWGRPDPDGPAAVERALALTGVDGLADRGADHLSGGQL
QRVWLASCLAQETGVLLLDEPTTYLDLRYQVELLDLIRDLADDHGIAVGVVLHDLDQAAAVADRITLLEAGRIVADGPPE
DVLTPERLTAVYGIRIDVDTDPLTGRLRTRPIGRHHIRTPRTRTPERLGTTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-36 42
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SC10G8.28c NP_631450.1 ABC transporter ATP-binding protein BAC0164 Protein 1e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SC10G8.28c NP_631450.1 ABC transporter ATP-binding protein VFG1042 Protein 1e-36 42
SC10G8.28c NP_631450.1 ABC transporter ATP-binding protein VFG0925 Protein 4e-38 41