Gene Information

Name : SC2H12.16 (SCO7217)
Accession : NP_631273.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 8021287 - 8022063 bp
Length : 777 bp
Strand : +
Note : -

DNA sequence : 
GTGATGCGGGTCGAGGTCGACGGACTCACGGTGGAGATGTCCGGCGCGCGGGTGCTCGACGACGTGTCGCTGCACGCGGA
CAGCGGCGGGTTCGTCGGGCTCGTCGGGCCCAACGGCAGCGGCAAGTCGACCCTGTTGCGCTGCGTGTACCGGGCGCTGC
GCCCCACGGCCGGAGTCGTCCGGCTCGGCGGTGACGAGCTGCCCTCACTGAGCCCGCGGGAGAGCGCACGCCGGCTCGCC
GCCCTGCCGCAGGAAGCGGCGGCGGAGTTCGACTTCACGGTGGCCGAGGTCGTGGCCATGGGCAGACTGCCGCACCAGGG
GGCGGCCGCCCGGACCTCCGACGAGGACCGGCACGCCTGCGCCGCCGCCCTGGAAGGAGTCGGGGCGGACCATCTGACCG
GCCGCGGCTTCCTCACCCTCTCCGGCGGGGAGAGGCAACGGGTCCTGATCGCCCGCGCACTCGCCCAGCAGCCGCGGATC
CTCGTCCTGGACGAGCCCACCAACCACCTGGACATCGCCCAGCAGTTGGAGGTCCTGTCCCTGGTGCGGGCCAGTGGGCC
GACCGTGCTCGCCGCCCTGCACGACCTCAACCTCGCCGCGCTCCACTGCGATCGCCTGCACGTCGTCGACGGCGGACGGA
TCGTCGCCTCCGGCGCCCCGCACGACGTGCTCACGGCCGAGCTGCTGGCCGACGTCTTCAAAGTCCGGGCGCACCGCGTC
GCCCATCCGGAGACCGGCGCGCTCCAACTGATCTTCGACCGGCTGCCGGTTCGGTAG

Protein sequence : 
MMRVEVDGLTVEMSGARVLDDVSLHADSGGFVGLVGPNGSGKSTLLRCVYRALRPTAGVVRLGGDELPSLSPRESARRLA
ALPQEAAAEFDFTVAEVVAMGRLPHQGAAARTSDEDRHACAAALEGVGADHLTGRGFLTLSGGERQRVLIARALAQQPRI
LVLDEPTNHLDIAQQLEVLSLVRASGPTVLAALHDLNLAALHCDRLHVVDGGRIVASGAPHDVLTAELLADVFKVRAHRV
AHPETGALQLIFDRLPVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-36 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-32 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-32 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-32 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-32 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-26 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SC2H12.16 NP_631273.1 iron ABC transporter ATP-binding protein BAC0164 Protein 1e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SC2H12.16 NP_631273.1 iron ABC transporter ATP-binding protein VFG1042 Protein 1e-36 43