Gene Information

Name : SC2H12.15 (SCO7216)
Accession : NP_631272.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Virulence
Product : FecCD-family membrane transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 8020184 - 8021290 bp
Length : 1107 bp
Strand : +
Note : SC2H12.15, possible FecCD-family membrane transport protein, len: 368 aa. Highly similar to many including: Yersinia pestis SW:HMUU_YERPE(EMBL:U60647) hemin transport system permease HmuU (334 aa), fasta scores opt: 674 z-score: 713.5 E(): 2.9e-32 40.4% i

DNA sequence : 
GTGGCCACGCTCCGCGACCGGATACCCGCCGCCCCACCGGACCGTACCGGGAACAGCGGGCCCCCACCGGCCAGGCGCGC
CTCACTTCCCCTGCTTGTGGCAGGGCTGTGCGTCGCGCTTCCCGTCTCGCTGGCCTGCGGGGCGTGCATCGGCGCGTCGG
GGCTCTCCTGGAGCGAGGCCCTGCACCACCTCTGGGCGGGCCTGACCGGAGGGACCATAGACGCGGACGACGTCGCCGCC
TACACCATCGTCTGGGAACTCCGGTTCCCCCGAGCCGTGCTCGCGGCCGTCGTCGGCGCCGGTCTGGCGTCCGTCGGCGT
CGCCGTCCAGGCCATGGTCCGCAACGCGCTGGCGGACCCGTTCGTCCTCGGCATCTCCTCCGGTGCCGCCGTCGGGGCCA
ACGCCGTGCTCATCTTCGGGGCCTTCGGCGCACTCGGTCTCTGGGCGCTGTCCACGGCGGCGTTCCTCTCCGCGCTCGCG
GCCATGGTGCTGGTGTACGCGGTCGCCCGGACCCCGCGGGGCCTGACCCCGCTCCGGCTGGTGCTGACCGGTACCGCGAT
GTACTACGGCTTCTCGGCCGTCACCACCTTCATGGTGTTCGCCGCCGAGCACGGCGAAGCGGCGCGGTCCGCCATGATGT
GGCTGCTGGGCAGCCTGGGCGGGGCGAACTGGTCCTCCGTACCGATCGCCGCGGGCGCGGTCCTCGGCGGCATCCTCCAT
CTCGGCTGGTCGGCCCGGCGCCTGAACGCCCTCGCGATGGGCGACGAGACCGCCGCCGCGCTGGGTGTGGACCCCGGACG
GCTGCGCAAGGAACTGTTCCTCACCGCCTCGGCCGTCACGGGTGCGGTGGTCGCGGTCAGCGGGGCGATCGGCTTCGTCG
GCCTGATGGTCCCGCACGCGGCCCGGATGCTGGTCGGCGCGGACCACCGCCGGCTGCTGGCCGTGGCGCCCCTGGGCGGA
GCCGTCCTGCTGGTCTGGGTCGACATCCTGTCCCGCGTGGTGCTCGCCCCCGCCGAACTGCCGCTGGGCGTCCTGACGGC
GGCGATCGGCGTGCCCTGCTTCGTCCTGCTGATGCGCCGCCGTACCTACACCTTCGGAGGCGTGTGA

Protein sequence : 
MATLRDRIPAAPPDRTGNSGPPPARRASLPLLVAGLCVALPVSLACGACIGASGLSWSEALHHLWAGLTGGTIDADDVAA
YTIVWELRFPRAVLAAVVGAGLASVGVAVQAMVRNALADPFVLGISSGAAVGANAVLIFGAFGALGLWALSTAAFLSALA
AMVLVYAVARTPRGLTPLRLVLTGTAMYYGFSAVTTFMVFAAEHGEAARSAMMWLLGSLGGANWSSVPIAAGAVLGGILH
LGWSARRLNALAMGDETAAALGVDPGRLRKELFLTASAVTGAVVAVSGAIGFVGLMVPHAARMLVGADHRRLLAVAPLGG
AVLLVWVDILSRVVLAPAELPLGVLTAAIGVPCFVLLMRRRTYTFGGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 8e-13 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SC2H12.15 NP_631272.1 FecCD-family membrane transport protein BAC0163 Protein 4e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SC2H12.15 NP_631272.1 FecCD-family membrane transport protein VFG1043 Protein 4e-13 41