|
Name : gabD; SC2C3.02; SC4G1.01 (SCO7035) Accession : NP_733722.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 7823274 - 7824713 bp Length : 1440 bp Strand : + Note : SC2C3.02, gabD, succinate-semialdehyde dehydrogenase (fragment), len: >422 aa; highly similar to SW:GABD_ECOLI (EMBL:M88334) Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) GabD, 482 aa; fasta scores: opt: 1329 z-score: 1466.8 DNA sequence : ATGACCGACACCCCCACGCAGCTCTTCCTCGGCGGTGCCTGGGCGGACGCCGCGGACGGCGCCGTCATGCCCGTGGACGA CCCGGCGACCGGCGAGATCCTGGCCCACGTCGCCGACGCGGGACCCAAGGACGCCCGGCTCGCCGAGGAGGCGGCGGTCC AGGCGCAGGAGGAGTGGGCCCGGGCGGCGCCGAGGGCGCGCAGCGAGATCCTGCGCCGCGCCTACGAGATCGTCCTGGAG CGCACGGACGCGCTGGCCCGCCTGATGACCTCCGAGATGGGCAAGCCGCTGGCCGAGGCCCGGGGCGAGGTGGCCTACGC GGCGGAGTTCTTCCGCTGGTTCTCCGAGGAGGCCGTCCGGATCGACGGCGGCCACGGCGTCCTGCCCGACGGACGCAACC GCATGCTGCTGTCCCGGCGCCCGGTGGGCCCCTGTCTGCTGATCACCCCGTGGAACTTCCCGCTCGCCATGGGCACCCGC AAGATCGGCCCCGCGGTCGCGGCCGGCTGCACGATGGTGCTCAAACCGGCCCCGCAGACCCCGCTCTCCAGCCTGGCCCT GGCCGCGATCCTCAAGGAGGCGGGTCTGCCCGACGGGGTGCTGAACGTCGTCACGACCTCGCGGGCGGGGGAGGTGTGCG AACCGCTGCTGCGCGGCGGGCGCATCCGCAAGCTGTCCTTCACCGGTTCGACGGCCGTGGGGCGGCTGCTCCTGGCACAG TGCGCGGACACCGTCGTGCGGACCTCGATGGAGCTGGGCGGCAACGCGCCGTTCGTGGTCTTCGACGACGCGGACCTCGA CGCGGCCGTGGACGGCGCGATGGTCGCCAAGATGCGCAACATGGGCGAGGCGTGCACCGCCGCCAACCGCTTCTTCGTGC ACCGCTCGGTGGCGGGGGAGTTCGCCGACCGGCTGGCCCGCCGGATGGGCGCGCTGGTGGTGGGCCCCGGCACCGGCGAC GGCGTCGACGTGGGACCGCTCATCGACGCCGCCGGGCGGGCCAAGGTCGAGGAGCTGGTCGCCGACGCGGTGGAGCGCGG CGCGCGGGTACTCGTCGGCGGCACCACGCCCGAGGGCCCCGGCTGCTTCTACCCGCCCACGGTACTCACCGACGTCGCAC CGGAGAGCCGCCTGATGGCGACGGAGATCTTCGGCCCGGTCGCCGCGATCCTCACCTTCGACGACGAGGACGAGGTGGTC CGCCGGGCCAACGACACCCCCTGGGGGCTCGTCGGCTACGTCTTCACCGAGGGCCTGGACCGCGCCCTGCGGGTCAGCGA GCGCCTGGACGTCGGCATGGTCGGACTCAACACCGGCCTGGTCTCCAATCCCGCCGCGCCCTTCGGAGGCGTCAAGCAGT CGGGGCTCGGCCGGGAGGGCGGCCGGGTCGGGATCGAGGAGTTCCTGGAGTACCAGTACGTGGCGCTGCCGACCGGGTGA Protein sequence : MTDTPTQLFLGGAWADAADGAVMPVDDPATGEILAHVADAGPKDARLAEEAAVQAQEEWARAAPRARSEILRRAYEIVLE RTDALARLMTSEMGKPLAEARGEVAYAAEFFRWFSEEAVRIDGGHGVLPDGRNRMLLSRRPVGPCLLITPWNFPLAMGTR KIGPAVAAGCTMVLKPAPQTPLSSLALAAILKEAGLPDGVLNVVTTSRAGEVCEPLLRGGRIRKLSFTGSTAVGRLLLAQ CADTVVRTSMELGGNAPFVVFDDADLDAAVDGAMVAKMRNMGEACTAANRFFVHRSVAGEFADRLARRMGALVVGPGTGD GVDVGPLIDAAGRAKVEELVADAVERGARVLVGGTTPEGPGCFYPPTVLTDVAPESRLMATEIFGPVAAILTFDDEDEVV RRANDTPWGLVGYVFTEGLDRALRVSERLDVGMVGLNTGLVSNPAAPFGGVKQSGLGREGGRVGIEEFLEYQYVALPTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-86 | 50 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 7e-91 | 48 |
