|
Name : SC5F2A.26c (SCO6743) Accession : NP_630816.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Unknown Product : transcriptional accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 7499508 - 7501850 bp Length : 2343 bp Strand : - Note : SC5F2A.26c, possible transcriptional accessory protein, len: 780aa; similar to SW:TEX_BORPE Tex, transcriptional accessory protein (exact function not known) from Bordetella pertussis (791 aa) fasta scores; opt: 2905, z-score: 2938.8, E(): 0, (59.5% ident DNA sequence : GTGACGACACCGGACGTAGGGTCCATCGAAAGCAGGATCGCCGACGAGCTCGGCGTACGGGAGCGGCAGGTGAAGGCCGC GGTCGAGCTGCTCGACGGCGGCTCGACGGTGCCCTTCATCGCCCGCTACCGCAAGGAAGCGACCGAGATGCTCGACGACG CGCAGCTGCGCACGCTCGAGGAGCGGCTGCGCTATCTGCGGGAGCTGGAGGAGCGGCGCGCGGCGATCCTCGACTCGGTC CGCGAGCAGGGCAAGCTCACCGAGGAGCTGGCGGCGCGCATCCGCGCGGCGGAGACCAAGGCGCGCCTGGAGGACATCTA CCTGCCGTTCAAGCCGAAGCGGCGGACGAAGGCGCAGATCGCGCGCGAGGCGGGTCTGGAGCCGCTGGCCGAGGGCCTGC TCGCCGACGCGTCGGTGGACCCGCCGGCCGCGGCGGCCGCGTTCGTCGACGCCGACAAGGGCGTGCCCGACCCGCAGGCG GCCCTGGACGGGGCGCGCTCGATCCTCACGGAGAAGTTCTCGGAGGACGCCGACCTGATCGGCGAGCTGCGCGAGCGGAT GTGGACGCGCGGGCGGCTCGCGGCCAAGGTCAAGGACGGCAAGGAGGAGGCCGGCGCCAAGTTCGCCGACTACTTCGACT TCGCCGAGCCGTTCACCGACCTGCCCTCGCACCGCGTGCTCGCGATGCTGCGCGGCGAGAAGGAGGACGTGCTCGACCTC GTCCTGGAGCCCGAGGAGGCCACCGAGGGCCCGTCGTCGTACGAGGCGATCGTCGCGAGCCGCTTCGGGATCGCGGACCG CGGCCGGCCCGCGGACAAGTGGCTGCGCGACACCGTCCGCTGGGCCTGGCGCACCCGCATCCTGGTGCACCTCGGCATCG ACCTGCGGCTGCGGCTGCGCACGGCCGCCGAGGACGAGGCGGTGAACGTCTTCGCCGCCAACCTCCGCGACCTGCTGCTG GCCGCACCGGCGGGCACCCGGGCGACGCTCGGCCTCGACCCCGGCTTCCGCACCGGTGTGAAGGTCGCCGTGGTCGACGC GACCGGCAAGGTCGTGGCCACCGACGTGATCCACCCGCACGTCCCGGCCAACCGGTGGGACGAGGCGATCGCCAAGCTCG CGCGGCTGGCGAAGGAGCACACGGTCGACCTGATCGCCATCGGCAACGGCACGGCCTCCCGCGAGACCGACAAGCTCGCC GGTGAACTCATCACCAAGCACCCCGAGTTGAAGCTGACCAAGGTGATGGTGTCCGAGGCGGGCGCCTCCGTGTACTCGGC CTCCGCCTTCGCCTCCCAGGAGCTGCCGGACATGGACGTCTCGCTGCGCGGCGCGGTGTCGATCGCCCGGCGGCTGCAGG ACCCGCTGGCCGAGCTGGTGAAGATCGACCCGAAGTCGATCGGCGTCGGCCAGTACCAGCACGACCTCTCCGAGGTGAAG CTGTCCCGCTCGCTGGACGCGGTGGTCGAGGACTGTGTGAACGGCGTGGGGGTGGACGTCAACACGGCCTCCGCGCCGCT GCTCGCCCGGGTCTCCGGCATCACCTCCGGGCTCGCGGAGAACATCGTGGCGCACCGCGACGCGAACGGACCGTTCTCCT CGCGGACCGCGCTGAAGAAGGTGTCCCGGCTCGGGCCCAAGGCGTACGAGCAGTGTGCGGGCTTCCTGCGGATCCGGGGC GGCGACGACCCGCTGGACGCGTCCAGCGTGCACCCGGAGGCGTACCCCGTGGTGCGGCGGATGGTGAAGACCGCCGGGCA GGAGGTGAGCGGCCTGATCGGCAACACGTCGGTGCTGCGGTCGCTGAAGCCGGACCGGTTCGTGGACGAGACGTTCGGTC TGCCGACGGTCACGGACATTCTGCGGGAGCTGGAGAAGCCGGGGCGCGACCCTCGGCCCGCCTTCAAGACGGCCACCTTC AAGGAGGGCGTGGAGAAGATCTCCGACCTGTCGTCCGGGATGGTGCTGGAGGGTGTCGTCACGAACGTCGCCGCGTTCGG GGCGTTCGTGGACGTCGGTGTGCACCAGGACGGGCTCGTGCACGTGTCCGCGATGTCGAGGACGTTCGTGAAGGATCCGC GGGACGTGGTGAAGCCCGGGGACATCGTGAAGGTGAAGGTGATGGACGTCGACATTCCGCGGAAGCGGATCTCGTTGACG TTGCGGTTGGACGACGAAGCCGCTCCGCAGGGGGAGCCGAAGAAGGAGCGTGGGGCGAGGCCTCCCCGGCAGAGGCAGCA GCGGCAGGGTGGTTCCGGGGGCGGTAAGGGGCGGCCTTCGTCGGCGCCTGCCGCGTCCAACGGAGCGATGGCGGACGCGT TGCGGCGGGCCGGGTTGGCGTAA Protein sequence : MTTPDVGSIESRIADELGVRERQVKAAVELLDGGSTVPFIARYRKEATEMLDDAQLRTLEERLRYLRELEERRAAILDSV REQGKLTEELAARIRAAETKARLEDIYLPFKPKRRTKAQIAREAGLEPLAEGLLADASVDPPAAAAAFVDADKGVPDPQA ALDGARSILTEKFSEDADLIGELRERMWTRGRLAAKVKDGKEEAGAKFADYFDFAEPFTDLPSHRVLAMLRGEKEDVLDL VLEPEEATEGPSSYEAIVASRFGIADRGRPADKWLRDTVRWAWRTRILVHLGIDLRLRLRTAAEDEAVNVFAANLRDLLL AAPAGTRATLGLDPGFRTGVKVAVVDATGKVVATDVIHPHVPANRWDEAIAKLARLAKEHTVDLIAIGNGTASRETDKLA GELITKHPELKLTKVMVSEAGASVYSASAFASQELPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDLSEVK LSRSLDAVVEDCVNGVGVDVNTASAPLLARVSGITSGLAENIVAHRDANGPFSSRTALKKVSRLGPKAYEQCAGFLRIRG GDDPLDASSVHPEAYPVVRRMVKTAGQEVSGLIGNTSVLRSLKPDRFVDETFGLPTVTDILRELEKPGRDPRPAFKTATF KEGVEKISDLSSGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSRTFVKDPRDVVKPGDIVKVKVMDVDIPRKRISLT LRLDDEAAPQGEPKKERGARPPRQRQQRQGGSGGGKGRPSSAPAASNGAMADALRRAGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
