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Name : SC4G2.20 (SCO6646) Accession : NP_630722.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Resistance Product : transport system permease Function : - COG functional category : - COG ID : - EC number : - Position : 7382319 - 7383629 bp Length : 1311 bp Strand : + Note : SC4G2.20, probable transport system permease, len: 436 aa; similar to e.g. M. tuberculosis TR:O53861 (EMBL:AL022004) membrane transport protein MTV043.42 (419 aa), fasta scores; opt: 771 z-score: 629.6 E(): 8e-28, 37.6% identity in 396 aa overlap DNA sequence : ATGACCTCCACACCCGCCCCCGCCGGCGGGCGGGCCGGCCAGGTGCCCGGCCGTCGTACCGCCCCGTTCGCCACGCTCTC CCCGCTGCTCCGGCTGCTCATCCTCACCCAGCTCGCCTTCAACATCGGCTTCTTCGCCGTGCTGCCCTTCCTCGCCGAGC ATCTGGGGCAGTCCGTCGGCATGGCGGGGTGGCTGGTCGGGTTCGTGCTCGGGCTGCGGACCTTCAGCCAGCAGGGGCTG TTCGTGGTCGGCGGGGCGCTCGCCGACCGGTACGGCATCCGGCCCGTCGTGCTCGCCGGGTGCGTGCTGCGGATCGCCGG GTTCGCGTGGCTCGGTTTCGCCGAGCGGACCTGGGCCGTCGTGAGTGCCGTACTGCTGATCGGGTTCGCCGCCGCGCTCT TCTCACCGGCCGTCGAGTCCGAGGTCGCCCGGCAGGCCGTCGGGTGGGAGGAGGAAGGGGGCGGGGACCGGACGCGGGTG CTGGCGCTGTTCACCGTCGCCGGGCAGGCCGGTGCCTTCGTCGGGCCGCTGCTTGGAGCGCTGCTGCTCGCCGTCGACTT CCGTACGGCCTGCCTCGCCGGGGCCGGGGTCTTCGTGCTGGTCCTCGCCGGGCACGCGTGGCTGCTGCCGCAGCGCGTTC CCGGGCGGGCCCAGGTCCGGATGAAGGGCGGCGCCCGGCTCGTGCTGCGCAACCGGCGCTTCCTCGCGCTGTGCTGCGCC TACGGCGCCTACCTCCTCGCCTACAACCAGCTCTACCTTGCCCTGCCCGCCGAGGTGGAACGGGCCGCCGGTTCGCAGGC GCCGCTGGCCTGGCTGTTCGCGCTGTCGTCGCTGCTGGTGGTGATCGCGCAGTTGCCGGTGACCCGGTGGGCGGGGGAGC GGCTGGCGCGGCGCCGGTCGATGGTGACGGGGCTGGTGCTGATCGCCGTCGGGTTCGCCGTCGTCGGCCTCGCGCGGCCC GCGGGGTGGACGGGGACGGGTGGGCTGCTGCCCGCCGCCGGGTTCGTCGTCCTGCTCACCCTCGGGCAGATGCTCGTCGC GCCCGTCGCCCGCGCCTGGGTGCCGGACCTCGCCGAGGACGGGCGGCTCGGGCTGTACACCGGGGCGCTGTCCTCGGTCT CCGGGCTGATCGTGCTGGCCGGCAGCTCCGCGACCGGCCTCCTGCTGGACACCGGCCTGCCGGTCGCCGTGCCGTGGCTG GTGCTGGCCGCCGTACCACTGGTGGCGGCGGCGACGCTGCCCCGGTGGCCGCACCGGGGCGCCGGAGCCACCGCACCAAC CCCCTCCACGGCCGGGTCGGGCCGGTCCTGA Protein sequence : MTSTPAPAGGRAGQVPGRRTAPFATLSPLLRLLILTQLAFNIGFFAVLPFLAEHLGQSVGMAGWLVGFVLGLRTFSQQGL FVVGGALADRYGIRPVVLAGCVLRIAGFAWLGFAERTWAVVSAVLLIGFAAALFSPAVESEVARQAVGWEEEGGGDRTRV LALFTVAGQAGAFVGPLLGALLLAVDFRTACLAGAGVFVLVLAGHAWLLPQRVPGRAQVRMKGGARLVLRNRRFLALCCA YGAYLLAYNQLYLALPAEVERAAGSQAPLAWLFALSSLLVVIAQLPVTRWAGERLARRRSMVTGLVLIAVGFAVVGLARP AGWTGTGGLLPAAGFVVLLTLGQMLVAPVARAWVPDLAEDGRLGLYTGALSSVSGLIVLAGSSATGLLLDTGLPVAVPWL VLAAVPLVAAATLPRWPHRGAGATAPTPSTAGSGRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1562 | YP_005681823.1 | MFS-type drug efflux transporter | Not tested | PiCp 6 | Protein | 1e-40 | 43 |
| CpC231_1564 | YP_005683922.1 | MFS-type drug efflux transporter | Not tested | PiCp 6 | Protein | 4e-41 | 43 |
| CpI19_1569 | YP_005686011.1 | MFS-type drug efflux transporter | Not tested | PiCp 6 | Protein | 4e-41 | 43 |
