Gene Information

Name : SC4H2.23 (SCO5802)
Accession : NP_629926.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Unknown
Product : ATP-dependent helicase
Function : -
COG functional category : K : Transcription
COG ID : COG1199
EC number : -
Position : 6343581 - 6345575 bp
Length : 1995 bp
Strand : +
Note : SC4H2.23, probable ATP-dependent helicase, len: 664 aa; similar to e.g. DING_ECOLI P27296 probable ATP-dependent helicase dinG (716 aa), fasta scores opt: 272 z-score: 409.8 E(): 1.3e-15, 26.5% identity in 686 aa overlap. Contains PS00017 ATP/GTP-binding

DNA sequence :
ATGACGAAGCCCTCACTCCCCGAACTCCTGCACGCCGCCGTCACCGCCGTCGGCGGCACGGAGCGTCCCGGCCAGGTGGC
CATGGCCGAAGCCGTCGAGGAAGCCATCGACGGCGGCTCCCATCTGCTCGTCCAGGCCGGCACCGGCACCGGTAAGTCGC
TGGGGTACCTGGTGCCCGCGCTGGCGCACGGCGAGCGGGTGGTCGTGGCCACGGCGACCCTGGCCCTGCAGCGCCAGCTG
GTCGAGCGGGACCTGCCCCGCACGGTCGACGCGCTCCACCCCCAGCTGCGCCGTCGCCCCGAGTTCGCGATGCTCAAGGG
GCGGTCGAACTACCTGTGCCTGCACCGGCTGCACGAGGGCGTGCCGCAGGATGAGGAGGAGGGCCTCTTCGACCAGTTCG
AGGCCGCCGCCCCCACCAGCAAACTGGGCCAGGACCTGCTGCGGATGCGCGACTGGGCGGACGAGGCCGAGACCGGCGAC
CGCGACGACCTCACGCCGGGCGTCTCCGACCGCGCCTGGGCGCAGGTGTCGGTGTCCTCCCGGGAGTGCCTGGGCGCCTC
GAAGTGCGCCTACGGCGCCGAGTGCTTCGCCGAGACGGCCCGTGAGCGGGCCAAGCTCTCCGAGGTCGTCGTCACCAACC
ACGCACTGCTCGCGATCGACGCCATCGAGGGCGCGCCCGTCCTCCCGCAGCACGAGGTGCTGATCGTCGACGAGGCGCAC
GAGCTGGTCTCCCGGGTCACCGGAGTCGCCACCGGCGAGCTGACCCCCGGCCAGGTCAACCGTGCGGTGCGCCGTGCCGC
GAAGCTGGTGAACGAGAAGGCCGCCGACCAGCTCCAGACCGCCGCGGAGGGCTTCGAGCGGCTGATGGAGCTGGCGCTGC
CGGGCCGCCTCGAGGAGGTCCCGGAGGACCTCGGCTACGCCCTGATGGCGCTGCGGGACGCCTGCCGCACGGTCATCTCG
GCGATCGGGACCACCCGCGACAAGTCCGTGCAGGACGAGGACGCGGTCCGCAAGCAGGCGCTGGCCTCCGTGGAGTCCGT
GCACGACGTCGCGGAGCGGATCACCAACGGCTCCGAGTGGGACGTCGTCTGGTACGAGCGCCACGACCGGTTCGGCGCCT
CGCTGCGGGTCGCCCCGATGTCCGTCTCCGGACTGCTGCGGGAGAAGCTCTTCACCGACCGCTCGGTCGTCCTGACCTCC
GCGACGCTGAAGCTGGGCGGCGACTTCAACGGCGTGGGGGCGTCCCTCGGCCTCGCCCCCGAGGGCACCGAGGGCGACGA
CGTGCCCCAGTGGAAGGGCGTCGACGTCGGCTCGCCCTTCGACTACCGCAAGCAGGGCATCCTCTACGTCGCCAAGCACC
TGGCCCGCCCCGCCAGGGACGGCGACCGCGGCGACATGCTCGACGAGCTGACCGAGCTGATCCAGGCGGCGGGCGGCCGC
ACCCTGGGCCTGTTCTCCTCGATGCGCGCGGCCCAGCTGGCCGCCGAGGAGCTGCGCTCGCGGATCCCGGAGTACCCGAT
CCTCCTCCAGGGCGAGGAGACCCTCGGCGAGCTGATCAAGAACTTCGCGGCCGACCCGCAGACCTGCCTCTTCGGCACCC
TGTCCCTGTGGCAGGGCGTCGACGTCCCCGGGCCCAGCTGCCAGCTGGTCGTCATGGACAAGATCCCGTTCCCGCGTCCC
GACGACCCTCTGATGAGCGCCCGGCAGAAGGCGGTGGAGGAGGCAGGGGGCAACGGCTTCATGGCGGTCGCCGCCACCCA
CGCCGCGCTGCTCATGGCGCAGGGCGCGGGCAGGCTGGTCCGTGCGTCGGGCGACCGCGGGGTGGTCGCCGTACTCGACC
AGCGGCTGGCGACGGCCCGGTACGGCAGCTATCTGAAGGCGTCGCTGCCCGACTTCTGGTTCACCACGGATCGCAACCAG
GTCCGCAAGTCACTCGCCGCGATCGACGCGAAGGCGCGGCAGACCGAGGCCGCAGGGCAGCCGGAGAGCGGCTGA

Protein sequence :
MTKPSLPELLHAAVTAVGGTERPGQVAMAEAVEEAIDGGSHLLVQAGTGTGKSLGYLVPALAHGERVVVATATLALQRQL
VERDLPRTVDALHPQLRRRPEFAMLKGRSNYLCLHRLHEGVPQDEEEGLFDQFEAAAPTSKLGQDLLRMRDWADEAETGD
RDDLTPGVSDRAWAQVSVSSRECLGASKCAYGAECFAETARERAKLSEVVVTNHALLAIDAIEGAPVLPQHEVLIVDEAH
ELVSRVTGVATGELTPGQVNRAVRRAAKLVNEKAADQLQTAAEGFERLMELALPGRLEEVPEDLGYALMALRDACRTVIS
AIGTTRDKSVQDEDAVRKQALASVESVHDVAERITNGSEWDVVWYERHDRFGASLRVAPMSVSGLLREKLFTDRSVVLTS
ATLKLGGDFNGVGASLGLAPEGTEGDDVPQWKGVDVGSPFDYRKQGILYVAKHLARPARDGDRGDMLDELTELIQAAGGR
TLGLFSSMRAAQLAAEELRSRIPEYPILLQGEETLGELIKNFAADPQTCLFGTLSLWQGVDVPGPSCQLVVMDKIPFPRP
DDPLMSARQKAVEEAGGNGFMAVAATHAALLMAQGAGRLVRASGDRGVVAVLDQRLATARYGSYLKASLPDFWFTTDRNQ
VRKSLAAIDAKARQTEAAGQPESG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1474 YP_001800868.1 ATP-dependent DNA helicase Not tested Not named Protein 1e-141 50