|
Name : SC5H4.08 (SCO5684) Accession : NP_629812.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Unknown Product : two-component system response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 6187781 - 6188494 bp Length : 714 bp Strand : + Note : SC5H4.08, probable two-component system response regulator, len: 237 aa; similar to TR:Q9X8Q7 (EMBL:AL049754) Streptomyces coelicolor two-component system regulator SCH10.18c, 228 aa; fasta scores: opt: 780 z-score: 922.5 E(): 0; 58.7% identity in 225 aa DNA sequence : ATGAGGCCCGCGGAACCAGCGAAGGAGCCGCGCGTGATCAGGACACTGGTCGCCGACGACCAGGCGGTGGTCCGCACCGG GTTCGTGAACCTCCTGAACACCCAGGAGGACATCGAGGTCGTCGCCGAGGCGGAGGACGGTGCGCAGGCGGTGCTGTCGG CCGGTGAGACCCGGCCCGACCTGGCGCTCCTGGACATCCGGATGCCGCACAAGAACGGCATCGAGGCGGCCCGGGAGATC CTGGCCGCCTCCGGCGGCGCCACGAAGATCCTGATGCTGACGACCTTCGGCCTCGACGAGTACGTGTACGACGCGCTCGC GGCCGGGGCGGGCGGCTTCCTGCTCAAGGACGCCACCTTCCCCGAACTGCTGCATGCGGTACGGGTGGTGGCCGGCGGCA ACGCCCTGCTGTCGCCCGAGATCACCAAGCGGCTGATCGCCGAGTTCGTGCACGCGCGCGGTTCGCGGCTGCCCGTCCCC GCCGCGGGTGACCTGACGGCCCGGGAGACGGAAGTGCTGACCCTGATCGCGCGGGGGCTGTCCAACGCGGAGATCGCGGG GCGCCTCACCATCACCGACCACACCGTGAAGACCCACATCAACCGGCTGTTCGCCAAGCTGGAGCTGCGCGACCGGGCCC AGGCGGTCATCGTCGCCTACGAACTGGGCCTGGTCCGCGCGGGCGGCGAGTCGGGTGGGGCCCGGCACCGGTAG Protein sequence : MRPAEPAKEPRVIRTLVADDQAVVRTGFVNLLNTQEDIEVVAEAEDGAQAVLSAGETRPDLALLDIRMPHKNGIEAAREI LAASGGATKILMLTTFGLDEYVYDALAAGAGGFLLKDATFPELLHAVRVVAGGNALLSPEITKRLIAEFVHARGSRLPVP AAGDLTARETEVLTLIARGLSNAEIAGRLTITDHTVKTHINRLFAKLELRDRAQAVIVAYELGLVRAGGESGGARHR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0091 | NP_938488.1 | two-component system response regulator | Not tested | Not named | Protein | 7e-23 | 42 |
| CD241_0088 | YP_005124357.1 | two-component system response regulator | Not tested | Not named | Protein | 5e-23 | 42 |
| regB | YP_001220830.1 | putative two-component system response regulator | Not tested | chp/tomA region | Protein | 9e-20 | 42 |
