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Name : SC3D11.12 (SCO5455) Accession : NP_629592.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Unknown Product : two-component system response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 5940593 - 5941267 bp Length : 675 bp Strand : + Note : SC3D11.12, possible two-component system response regulator, len: 224 aa; similar to many proposed response regulators e.g. TRNEW:CAA74720 (EMBL:Y14336) response regulatory protein SenR from Streptomyces reticuli (217 aa) fasta scores; opt: 643, z-score: DNA sequence : ATGACCGATGACGAAGCGATTGCCGCCGCGGCGGCCGACGACGCCGTGATCTCCCTGCTCATCGTCGACGACCACCCCGT GGTCCGCGACGGCCTGCGCGGCATGTTCGAGTCCGCGCCCGGCTTCCGCGTCCTCGGCGAGGCGGCGGGCGGCACCGAGG CCGTGGAACGGGCCGCCGCGCTCGACCCCGACGTGGTCCTCATGGACCTGCGGATGCCGGGCGGTTCGGGCGTGGCCGCC ATCCGTGAGCTGACCAGGCGCGGCGCCCGCGCGAGGGTGCTCGTGCTCACCACGTACGACACCGACTCCGACACGCTGCC CGCGATCGAGGCCGGCGCGACCGGCTACCTCCTCAAGGACGCGCCCCGCGACGACCTGTTCACCGCGGTCCGCGCGGCGG CCCAGGGGCGCACGGTGCTGTCCCCGGCGGTCGCCTCCCGCCTGGTCTCCGCCGTCCGCGCCCCGAAGACCCCCGGCGCC GAGCCCCTCTCCGCCCGCGAGCGCGAGGTGCTCGCCCTGGTGGCGCGCGGCACCTCCAACAAGGAGATCGCCCGGGAGCT GTTCATCAGCGAGGCGACCGTGAAGACCCACCTCACCCACCTCTACGCCAAGCTGGGCGTCAACGACCGGGCGGCGGCCG TCGCGACGGCGTACGACCGGGGCATCCTCGGCTGA Protein sequence : MTDDEAIAAAAADDAVISLLIVDDHPVVRDGLRGMFESAPGFRVLGEAAGGTEAVERAAALDPDVVLMDLRMPGGSGVAA IRELTRRGARARVLVLTTYDTDSDTLPAIEAGATGYLLKDAPRDDLFTAVRAAAQGRTVLSPAVASRLVSAVRAPKTPGA EPLSAREREVLALVARGTSNKEIARELFISEATVKTHLTHLYAKLGVNDRAAAVATAYDRGILG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| regB | YP_001220830.1 | putative two-component system response regulator | Not tested | chp/tomA region | Protein | 1e-25 | 43 |
