Gene Information

Name : SC9E12.02 (SCO5117)
Accession : NP_629266.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Unknown
Product : peptide transport system peptide-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4166
EC number : -
Position : 5563836 - 5565470 bp
Length : 1635 bp
Strand : +
Note : SC9E12.02, possible peptide transport system peptide-binding protein, len: 544 aa; similar to SW:OPPA_BACSU (EMBL:X56347) Bacillus subtilis oligopeptide-binding protein OppA precursor, 545 aa; fasta scores: opt: 648 z-score: 642.6 E(): 2.5e-28; 26.1% iden

DNA sequence :
ATGCGCGGAGCCACGCACGCCAGATGGGCCGCTTGCGCGGCGGCGGTAGCCCTCGCGGCGACGGCCTGCGGCGGCGGGGG
CGGGGACGGAGGCAGCGGCGGCGGCAGCGGCGGCGTGCTCAGCTCCTCCTGGGGCGACCCCCAGAACCCGCTGGAGCCGG
CCAACACCAACGAGGTGCAGGGCGGCAAGGTCCTCGACATGATCTTCCGGGGGCTGAAGAAGTACGACCCCGGGACCGGC
GAGGCGCAGAACATGCTCGCCGAGAAGATCGACACCTCCGACTCGCAGAACTTCACCGTCACCGTCAAGGACGGCTGGAC
CTTCAGCAACGGCGAGAAGGTCACCGCGCAGTCCTTCGTGGACGCCTGGAACTACGGCGCGAGCCTGAAGAACAACCAGC
GCAACGCGTACTTCTTCGCCTACATCGACGGCTACGACAAGGTGCACCCCGAAAGCGGCTCGCAGAGCACCGACACGCTC
TCGGGGCTGAAGGTGACCGGCCCCCGCACCTTCACGATCAAGCTCAGCCAGAAGTTCTCCACGTTCCCCGACACCCTCGG
CTATCCGGCCTTCGCGCCGCTGCCCAAGGCGTTCTTCGACGACCACGACGCCTGGCTGAAGAAGCCCGTCGGCAACGGCC
CCTACCAGGTCGACAACTACACCCGCGGCTCCCAGATGTCCCTGCGCAAGTGGGACGACTACCCCGGCCCGGACAAGGCG
CAGAACGGCGGCGTGGACCTCAAGGTCTACACCGACAACAACACCGCCTACACCGACCTGATCGCGGGCAACCTCGACCT
CGTCGACGACGTCCCGGCCTCCCAGCTCAAGAACGTCAAGAACGACCTCGGCGACCGGTACATCAACACCCCGGCGGGCA
TCATCCAGACCCTCGCCTTCCCGTTCTACGACAACGACTGGAACAAGTCCGGCTCGGAGAAGGTCCGCAAGGGCCTGTCC
ATGGCGATCGACCGCAAGCAGATCACCGACACCATCTTCCAGAACACCCGCACCCCGGCCACCGACTGGACCTCACCGGT
CCTCGGCAAGGACGGCGGCTACAAGCCGGGCCTGTGCGGGGACGCCTGCGAGTACAACGCCGCGGAGGCCAAGAAGCTGG
TCAAGGAGGGCGGCGGACTCCCCGGCGGGCAGGTCAAGATCACCTACAACGCCGACACCGGCTCCCACAAGCAGTGGGTC
GACGCGGTCTGCAACTCCATCAACAACGCCCTGGACAACGACCGCGCCTGCGCCGGGAACCCGGTCGGCACCTTCGCCGA
CTTCCGCAACCAGATCACCAACCAGAAGATGAGCGGCCCCTTCCGCGCGGGCTGGCAGATGGACTACCCGCTCATCCAGA
ACTTCCTCCAGCCGCTGTACTACACCAACGCCTCCTCCAACGACGGCAAGTGGTCCAGCAAGAAGTTCGACGACCTCGTC
GACCAGGCCAACGCCGAGACCGACACCGCCAAGGCCGTCGGCCTCTTCCAGCAGGCCGAGGAGGTCCTCAGGGACGACAT
GGGGGCCATCCCGCTCTGGTACCAGAACGGCAGCGCAGGCTACTCCGACCGGCTCTCCAACGTGAAGCTCAACCCGTTCA
GCGTCCCGGTCTACAACGAGATCAAGGTCGGCTGA

Protein sequence :
MRGATHARWAACAAAVALAATACGGGGGDGGSGGGSGGVLSSSWGDPQNPLEPANTNEVQGGKVLDMIFRGLKKYDPGTG
EAQNMLAEKIDTSDSQNFTVTVKDGWTFSNGEKVTAQSFVDAWNYGASLKNNQRNAYFFAYIDGYDKVHPESGSQSTDTL
SGLKVTGPRTFTIKLSQKFSTFPDTLGYPAFAPLPKAFFDDHDAWLKKPVGNGPYQVDNYTRGSQMSLRKWDDYPGPDKA
QNGGVDLKVYTDNNTAYTDLIAGNLDLVDDVPASQLKNVKNDLGDRYINTPAGIIQTLAFPFYDNDWNKSGSEKVRKGLS
MAIDRKQITDTIFQNTRTPATDWTSPVLGKDGGYKPGLCGDACEYNAAEAKKLVKEGGGLPGGQVKITYNADTGSHKQWV
DAVCNSINNALDNDRACAGNPVGTFADFRNQITNQKMSGPFRAGWQMDYPLIQNFLQPLYYTNASSNDGKWSSKKFDDLV
DQANAETDTAKAVGLFQQAEEVLRDDMGAIPLWYQNGSAGYSDRLSNVKLNPFSVPVYNEIKVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 3e-84 43