Gene Information

Name : 2SCK8.01; SCK20.16 (SCO4875)
Accession : NP_733651.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 5306624 - 5307574 bp
Length : 951 bp
Strand : +
Note : 2SCK8.01, probable sugar transferase (fragment), len: >256 aa; similar to SW:GTRB_BPSFX (EMBL:AF056939) Bacteriophage SfX (Shigella flexneri bacteriophage X) bactoprenol glucosyl transferase (EC 2.4.1.*) GtrB, 305 aa; fasta scores: opt: 659 z-score: 787.3

DNA sequence :
ATGCTCATATCCATCGTCGCCCCCTGCTACAACGAGGAAGACGTCATAGAACGCTTCCACGCCGCCGTGCAGAAGGTCGC
CGACGACCTGCTGCCGCTCGGACACGACATGGAGTTCGTGTACGTCGACGACGGCAGCCGCGACCGGACCCTCACCCTCC
TGGAACAGCTCGCCGAGCACGATCCGCGCGTCCGCTACGTCTCCTTCAGCCGCAACTTCGGCAAGGAGGCCGCCCTCCTC
GCCGGTCTGCGCCACTCCTCCGGCGACTCGGTGGTGGTCATGGACGCCGACCTCCAGCACCCGCCGGAGCTGATCGGACG
CATGGTCGAGCTGCGCGACGAGGGCTACGACCAGGTCCTCGCCCGGCGCAGCCGGCGCGGCGACCGGTTCACCCGGACCC
TCACCGCCCGCCTGTACTACCGGCTGGTCAACCGGCTCGTCGACGTCGAACTCGTCGACGGCGTGGGCGACTTCCGGCTG
CTGTCGCGGCGCGTGGTGGACGCGGTGCTGGGCCTGACCGAGTACAACCGCTTCTCCAAGGGCCTGTTCGCGTGGGTCGG
CTTCCCCAGCACCACCTTCGAGTACGAGAACGCCGTACGCGAGCACGGCAGCAGCTCCTGGTCCCTGAAGTCCCTGCTCA
ACTACGGCCTCGACGGCCTGCTGTCGTTCAACAACCGTCCGCTGCGCGCCGCCCTCCACCTCGGCATGGTGCTGCTGACC
TGTGCCGGGCTCTACACGGCGTGGATCGTGGGCGCCGCGCTCGTCAACGGCGTGGAGACCCCCGGGTATGTCACCATCAT
CACCGTCGTCACCGCGCTCGCGGGGGTGCAGATGGTGATGCTGGGCGTCGTCGGGGAGTACACCGGCCGGATCTACTACG
AGGTCAAGGGACGTCCGCACTTCCTGGTGAAGGCGACCAACGTGGAACGGACGAAGGACCTCATCCGCTGA

Protein sequence :
MLISIVAPCYNEEDVIERFHAAVQKVADDLLPLGHDMEFVYVDDGSRDRTLTLLEQLAEHDPRVRYVSFSRNFGKEAALL
AGLRHSSGDSVVVMDADLQHPPELIGRMVELRDEGYDQVLARRSRRGDRFTRTLTARLYYRLVNRLVDVELVDGVGDFRL
LSRRVVDAVLGLTEYNRFSKGLFAWVGFPSTTFEYENAVREHGSSSWSLKSLLNYGLDGLLSFNNRPLRAALHLGMVLLT
CAGLYTAWIVGAALVNGVETPGYVTIITVVTALAGVQMVMLGVVGEYTGRIYYEVKGRPHFLVKATNVERTKDLIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-43 41
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 4e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
2SCK8.01; SCK20.16 NP_733651.1 sugar transferase VFG0670 Protein 8e-45 42