Gene Information

Name : SCD19.06 (SCO4351)
Accession : NP_628521.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Unknown
Product : DNA invertase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 4767115 - 4767627 bp
Length : 513 bp
Strand : +
Note : SCD19.06, probable DNA invertase, len: 170 aa; similar to SW:DNIV_BPP1 (EMBL:X01828) Bacteriophage P1 DNA-invertase (site-specific recombinase) Cin, 186 aa; fasta scores: opt: 471 z-score: 560.8 E(): 9.9e-24; 48.8% identity in 170 aa overlap. Contains Pfa

DNA sequence :
TTGCAGCGCGACACACTGACGGCCGCAGGCTGCGCCCGGACCTTCGAGGACAAGGCGTCGGGCAAGAACGCCGACCGGCC
GGAGCTGCGGTCAGCACTCGACTACGCCCGCGCTGGCGACACCCTGTGCGTGTGGAAGCTCGACCGCTTTGCCCGGTCGC
TCATCGACCTTGTGACCATGGTCGACACGCTTCGGGAGCGTGGTATCGGGTTCAAGGTGCTCACGGGTGCACTGGCCAAC
ATCGACCCCGGCACGGCCGATGGCCGTCTCATGCTTCAGGTGGTAGGAGCCATGGCGGAGTTCGAGCGCAGCCTCATCAA
GGAGCGCACCCGCGCCGGACTCGATGCAGCCAAGGCGCAGGGGCGTACCGGCGGACGGCCGTCCGTCGTGAACGAGGACG
TGCTGACCGTGGCCCGCGCGAGGAAGGCGAAGAGAGAGAGTGTCAGCGCCGTCGCCAAGGCTCTGGGCGTCTCCAGGGCC
ACGCTGTACCGGCACCTCGCAGACGACTCCTGA

Protein sequence :
MQRDTLTAAGCARTFEDKASGKNADRPELRSALDYARAGDTLCVWKLDRFARSLIDLVTMVDTLRERGIGFKVLTGALAN
IDPGTADGRLMLQVVGAMAEFERSLIKERTRAGLDAAKAQGRTGGRPSVVNEDVLTVARARKAKRESVSAVAKALGVSRA
TLYRHLADDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 1e-32 52
res AGF34985.1 resolvase Not tested SGI1 Protein 1e-32 52
res AGF35025.1 resolvase Not tested SGI1 Protein 1e-32 52
res AGF35059.1 resolvase Not tested SGI1 Protein 1e-32 52
res AGK06929.1 resolvase Not tested SGI1 Protein 1e-32 52
res AGK06966.1 resolvase Not tested SGI1 Protein 1e-32 52
res AGK07012.1 resolvase Not tested SGI1 Protein 1e-32 52
res AAK02044.1 resolvase Not tested SGI1 Protein 1e-32 52
res AGK07070.1 resolvase Not tested SGI1 Protein 1e-32 52
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 2e-30 49
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 2e-30 49
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 1e-30 49
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-25 47
res YP_005124341.1 DNA-invertase Not tested Not named Protein 8e-16 45
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 5e-31 42
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-31 41
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-31 41
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 7e-25 41