Gene Information

Name : SCH63.02c (SCO3755)
Accession : NP_627945.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4127975 - 4128769 bp
Length : 795 bp
Strand : -
Note : SCH63.02c, possible ABC transport system ATP binding protein, len: 164 aa; similar to TR:CAB81857 (EMBL:AL161691) Streptomyces coelicolor ABC-transporter ATP binding protein SCD40A.12c, 246 aa; fasta scores: opt: 1007 z-score: 1087.6 E(): 0; 67.4% identit

DNA sequence :
GTGGACCACCGCCCCGAGGTTCCGGCCGCCACGCCCGGGCTCGCCGTCGAGCTGCGCGGGGTCCAGCGGCGGTACGGCCG
CGGCGCGGGCACCGTGCACGCCCTCGCGGGCATCGACCTCGCCCTGCCGCGCGGCACCTTCACCGCCGTCATGGGCCCGT
CCGGGTCCGGCAAGTCCACCTTCCTGCAGTGCGCCGCCGGGCTCGACCGGCCGTCGGCGGGATCGGTGCGCCTCGGCGGC
ACGGAGATCACGGGCATGAACGAGAACGAGCTGACCGAGCTGCGCCGCAGCCGCCTCGGCTTCGTCTTCCAGGCGTTCAA
CCTGCTGCCGTCGCTGACCGTGGAGCAGAACGTCCTGCTGCCCATGCGCCTGGCCGGGCAGCGCCAGGACCACCGCCGGG
CGGCCGACGTACTCGCGCAGGTCGGGCTCGCCGACAAGGCGCGACGCCGGCCCGGCGAGCTGTCCGGCGGCCAGCAGCAG
CGGGTGGCCGTCGCCCGCGCCCTGGTCACCGCCCCCGACGTGATCTTCGCCGACGAGCCCACCGGCGCCCTCGACACCGG
CACCGCGGCCGAGGTCCTCGGCCTGCTCCGGCAGGCGGTGGACGGCCTCGGCGCCACCGTCGTCATGGTCACCCACGACC
CGGCCGCGGCCGCCTGGGCCGACCGGGTGCTGTTCCTCGCCGACGGGGCCTTCGCCGACCACCTGGAGCGGGGTTCGGCG
GAGCAGATCGCGGCGCGGATGACCGCGCTCACCGGCCGGGCGCGGGCTACGGCCGCGGCGGGGGTGGCGGCATGA

Protein sequence :
MDHRPEVPAATPGLAVELRGVQRRYGRGAGTVHALAGIDLALPRGTFTAVMGPSGSGKSTFLQCAAGLDRPSAGSVRLGG
TEITGMNENELTELRRSRLGFVFQAFNLLPSLTVEQNVLLPMRLAGQRQDHRRAADVLAQVGLADKARRRPGELSGGQQQ
RVAVARALVTAPDVIFADEPTGALDTGTAAEVLGLLRQAVDGLGATVVMVTHDPAAAAWADRVLFLADGAFADHLERGSA
EQIAARMTALTGRARATAAAGVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-44 49
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-46 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-46 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-46 47
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-23 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCH63.02c NP_627945.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-43 47
SCH63.02c NP_627945.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-46 45
SCH63.02c NP_627945.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-44 44
SCH63.02c NP_627945.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-43 44