Gene Information

Name : SCH22A.30 (SCO3752)
Accession : NP_627943.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4121930 - 4122688 bp
Length : 759 bp
Strand : +
Note : SCH22A.30, possible ABC transporter ATP-binding protein, len: 252 aa; similar to TR:Q9XAA7 (EMBL:AL096837) Streptomyces coelicolor ABC transporter ATP-binding protein SCF43A.08, 264 aa; fasta scores: opt: 848 z-score: 944.8 E(): 0; 56.0% identity in 243 a

DNA sequence : 
ATGAGCACCGCCGTCCCGGCCGCCACCGCCACCGGGCGCCGGGCGCCCGCCATCGCGCTGGACCGGGTCGCCCGGACCTA
CCCGGGCGGTGTCCGCGCCCTCGACGACGTGTCGCTGACCGTGGAGCACGGCACGTTCCTCGCGGTGATGGGGCCCTCCG
GGTCCGGCAAGAGCACGCTGATGCACTGCGCGGCCGGACTGGACTCCCCCACCTCCGGCAGCGTCCGCATCGACGGGCGG
GAGATCTCCGGCCTGAACGAGACCCGCCGCACCGAACTGCGCCGCGAACGCGTCGGGTTCGTGTTCCAGGCGTACAACCT
CATTCCCTCGCTCAGCGTCGAGGACAACATCACGCTGCCGCTGCGCCTGGCGGGACGGCGCCCGGACCGGGAGTGGCTGC
GCGCGCTGACCGAGCGGGTGGGTCTTGCCGACCGGCTGTCGCACCGCCCGGCCGAGCTGTCCGGCGGTCAGCAGCAACGG
GCCGCCGTCGTGCGGGCGCTGGCGGCGAAACCGGCCGTCGTCTTCGCGGACGAGCCGACCGGCGCGCTGGACCTGCGCAG
CGCCCACCAGGTACTCGGCCTGCTGCGCGCCCTCGTCGACGACCTGGGCCAGACGGTGGTCATGGTCACCCACGACCCGG
CCGCCGCGGCCCGCGCCCACCGGGCGCTGGTGATGGCCGACGGCCGGGTGGTCGAGGCCCTGGAGCGGCCGACGGCCCCG
CAACTGGCCGAGCGTCTCGTCGCGTTGGGAGAGCGGTAG

Protein sequence : 
MSTAVPAATATGRRAPAIALDRVARTYPGGVRALDDVSLTVEHGTFLAVMGPSGSGKSTLMHCAAGLDSPTSGSVRIDGR
EISGLNETRRTELRRERVGFVFQAYNLIPSLSVEDNITLPLRLAGRRPDREWLRALTERVGLADRLSHRPAELSGGQQQR
AAVVRALAAKPAVVFADEPTGALDLRSAHQVLGLLRALVDDLGQTVVMVTHDPAAAARAHRALVMADGRVVEALERPTAP
QLAERLVALGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCH22A.30 NP_627943.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-31 48
SCH22A.30 NP_627943.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-36 48
SCH22A.30 NP_627943.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-32 44
SCH22A.30 NP_627943.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-32 44
SCH22A.30 NP_627943.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-23 41