Gene Information

Name : dldh; SC66T3.05 (SCO3594)
Accession : NP_627789.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Resistance
Product : D-lactate dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1052
EC number : -
Position : 3971293 - 3972306 bp
Length : 1014 bp
Strand : +
Note : SC66T3.05, dldh, probable D-lactate dehydrogenase, len: 337 aa; highly similar to many e.g. TR:O33805 (EMBL:U8296) Streptomyces toyocaensis D-lactate dehydrogenase (330 aa), fasta scores; opt: 1470 z-score: 1711.8 E(): 0,71.4% identity in 318 aa overlap.

DNA sequence :
ATGACCTTCTCCTCGACCTCCTCGGCCCCTCCACCGTCACCGCTCCTCCCGGCAACGAGAATCACGGTTTACGGCTGCGG
GCGGGACGAGGCCGCCTTGTTCCGCCGGACGGCACCCCGTTTCGGCGTCGAGGCGACTCTCACGGAGGCCGCCGTATCCG
AAGAGAACGCCGAGATGGCGGCCGGAAACCAATGCATCAGCATTGACCACAAGACCCCGGTCACACCTGCCACTCTCCGC
GCTCTCCACCGGGCCGGCGTGACGTACATATCCACCCGGAGTATCGGTTACAACCACATCGATGTGACATACGCGGCCGG
CGTGGGGATATCCGTCGAGAACGTCACCTACTCCCCCGCCGGCGTGGCCGACTACACCCTGATGCTCATGCTGATGGCGG
TGCGCAACGCGAAATCCACCGTCCGCCGCGCGGAGCTGCACGACTACCGGCTGAACGAGATACGCGGTAAGGAGCTGCGC
GACCTGACCGTCGGAGTGATCGGGACGGGGCGTATCGGTGCGGCGGTCGTGGACAGGCTGCGGGGTTTTGGCTCCCGGGT
ACTGGCCTACGGAAAACGGCCCACCATCGCGGCAGATTACGTCTCTCTCGACGAGTTGCTGCGGTCGAGCGACATCGTGT
CGCTGCACGTACCGCTGACCCCGGACACGCATCACCTTCTCGATCAAAGCCGTATCCGGCGGATGAAAAGTGGCGCTTTC
GTCATCAACACCGGACGCGGCCCGCTCATCGACACCGAAGCGCTGGTACCGGCGTTGGAGAGCGGCAGGTTGAGCGGTGC
GGCGCTGGATGTCATCGAGGGCGAGGAAGGGATCTTCTACGCCGACTGCAGAAACAGAACCATCGAAAGCACGTGGCTCC
CGCGGCTGCAGAAAATGCCGAACGTACTCATCAGCCCGCACACCGCCTATTACACCGACCACGCCCTGATGGACACGGTC
GAGAACTCCATCATCAACTGCCTTAATTTCGGAAGCAGGAAACAGCATGGCTGA

Protein sequence :
MTFSSTSSAPPPSPLLPATRITVYGCGRDEAALFRRTAPRFGVEATLTEAAVSEENAEMAAGNQCISIDHKTPVTPATLR
ALHRAGVTYISTRSIGYNHIDVTYAAGVGISVENVTYSPAGVADYTLMLMLMAVRNAKSTVRRAELHDYRLNEIRGKELR
DLTVGVIGTGRIGAAVVDRLRGFGSRVLAYGKRPTIAADYVSLDELLRSSDIVSLHVPLTPDTHHLLDQSRIRRMKSGAF
VINTGRGPLIDTEALVPALESGRLSGAALDVIEGEEGIFYADCRNRTIESTWLPRLQKMPNVLISPHTAYYTDHALMDTV
ENSIINCLNFGSRKQHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2295 NP_815952.1 D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 2e-95 61
vanHB YP_008394258.1 VanH protein, D-specific alpha-keto acid dehydrogenase Not tested Not named Protein 3e-94 60

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dldh; SC66T3.05 NP_627789.1 D-lactate dehydrogenase NC_014475.1.orf2.gen Protein 6e-100 62
dldh; SC66T3.05 NP_627789.1 D-lactate dehydrogenase NC_005054.2598279.p0 Protein 6e-100 62
dldh; SC66T3.05 NP_627789.1 D-lactate dehydrogenase AF155139.2.orf4.gene Protein 7e-98 62
dldh; SC66T3.05 NP_627789.1 D-lactate dehydrogenase U35369.1.gene5.p01 Protein 6e-96 61
dldh; SC66T3.05 NP_627789.1 D-lactate dehydrogenase AF310956.2.orf4.gene Protein 6e-95 60
dldh; SC66T3.05 NP_627789.1 D-lactate dehydrogenase FJ349556.1.orf3.gene Protein 4e-95 58
dldh; SC66T3.05 NP_627789.1 D-lactate dehydrogenase AF130997.1.orf3.gene Protein 9e-85 56