|
Name : nhaA (SCO3564) Accession : NP_627762.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Unknown Product : pH-dependent sodium/proton antiporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3004 EC number : - Position : 3943390 - 3944814 bp Length : 1425 bp Strand : + Note : exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH DNA sequence : GTGACCGCGCCCCGCACCCCCCGCAAAGCCTTCGGACGGCTGTCCCTGCCGGAGCGCACCTACCTCGCGGACGCGCTGCG CACCGAGACCGTCGGCGGCGTCCTGCTGCTCGTCGCCGCGATCGCCGCCCTGGTGTGGGCGAACATACCGGCGCTGCACG ACAGCTACGAGAGCGTCAGCCACTTCCACTTCGGTCCCGCGGCCCTCGGTCTGAACCTGTCGGTCGCACACTGGGCCGCC GACGGGCTTCTGGCGATCTTCTTCTTCGTCGCCGGCATCGAACTCAAACGCGAACTGGTCGCCGGTGATCTGAAGGACCC CAAGGCCGCCGCGCTCCCGGTGGTGGCGGCGCTGTGCGGCATGGTCGTACCGGCGGTCGTCTACACCGTCACCAGCACCG CGGGCGGCGGCTCCCTGTCCGGCTGGGCCGTGCCGACCGCCACCGACATCGCCTTCGCGCTCGCCGTACTCGCCGTCATC GGCACGTCGCTGCCGAGCGCGCTGCGCGCCTTCCTGCTGACGCTCGCCGTCGTCGACGACCTGTTCGCCATCCTGATCAT CGCGGTCTTCTTCACCGAGACCCTGAACTTCGCCGCGCTGGGCGGCGCGGTCGTCGGCCTCGCGGTCTTCTGGCTGCTGC TGCGCAAGGGGGTGCGCGGCTGGTACGTGTACGTGCCGCTCGGCCTGGTGATCTGGGCCCTCATGTACAACAGCGGCGTC CACGCCACCATCGCCGGCGTCGCGATGGGCCTGATGCTGCGCTGCCACCGGCGCGAGGGCGAGGACCACTCCCCCGGCGA GCACATCGAACACCTGGTGCGCCCGCTGTCGGCGGGCCTGGCCGTGCCGCTGTTCGCGCTGTTCAGCGCGGGTGTGGCCA TCACCGGCGGGGCGCTGGCCGACGTGTTCACCAAGCCGGAGACCCTCGGTGTCGTACTCGGGCTCGTCGTCGGCAAGACG CTGGGCATCTTCGGCGGCACCTGGCTGACCTCGCGCTTCACCAGGGCTTCGCTCAGCGACGACCTCCAGTGGGCCGACGT GTTCGCGGTGGCGACCCTGGCCGGCATCGGGTTCACCGTCTCGCTGCTGATCGGCGAGCTGGCCTTCGAGGACGACGCGG CGATGACGAGCGAGGTCAAGGCCGCCGTCCTGACCGGCTCGCTGATCGCGGCGGCCCTGGCCACGGTGCTGCTGAAGATA CGGAACGCGAAGTACCGGGGGATGGTCGCGGAGGAGGAGCGCGACGACGACCTCAGCGGTGTCCCCGACATCTACGAGGA GGACGACCCCGCGTACCACCTGCGGGTGGCCGCCATCTACGAGAAGAAGGCCGCCGAGCACCGCCGGATCGCCGAGGAGA TGGAGTCGGCGCGGCTTGCCGAAGTGGCGGGCGGGGCAGGCGATGAGGGCGACGGTCCGGCATGA Protein sequence : MTAPRTPRKAFGRLSLPERTYLADALRTETVGGVLLLVAAIAALVWANIPALHDSYESVSHFHFGPAALGLNLSVAHWAA DGLLAIFFFVAGIELKRELVAGDLKDPKAAALPVVAALCGMVVPAVVYTVTSTAGGGSLSGWAVPTATDIAFALAVLAVI GTSLPSALRAFLLTLAVVDDLFAILIIAVFFTETLNFAALGGAVVGLAVFWLLLRKGVRGWYVYVPLGLVIWALMYNSGV HATIAGVAMGLMLRCHRREGEDHSPGEHIEHLVRPLSAGLAVPLFALFSAGVAITGGALADVFTKPETLGVVLGLVVGKT LGIFGGTWLTSRFTRASLSDDLQWADVFAVATLAGIGFTVSLLIGELAFEDDAAMTSEVKAAVLTGSLIAAALATVLLKI RNAKYRGMVAEEERDDDLSGVPDIYEEDDPAYHLRVAAIYEKKAAEHRRIAEEMESARLAEVAGGAGDEGDGPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nhaA1 | YP_001220808.1 | NahA family Na(+)/H(+) antiporter | Not tested | chp/tomA region | Protein | 6e-58 | 51 |
