Gene Information

Name : SCE25.30 (SCO3089)
Accession : NP_627308.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3381453 - 3382223 bp
Length : 771 bp
Strand : +
Note : SCE25.30 probable ABC transporter ATP-binding protein, len: 256 aa; similar to TR:CAB81857 (EMBL:AL16169) Streptomyces coelicolor ABC transporter ATP-binding protein SCD40A.12c, 246 aa; fasta scores: opt: 922 z-score: 1039.0 E(): 0; 58.4% identity in 238

DNA sequence : 
GTGACCACCGCACCCATCGCCGACCGGTCCACCCTCGTGGCCGCGCGCGCCACGGAGCTTTCCAAGATCTACGGCCAGGG
CGAGACCCAGGTGGTCGCCCTGGACCGGGTCTCCATCGACTTCCGGCAGGCCGAGCTCACCGCGATCATGGGCCCCTCCG
GCTCCGGCAAGTCCACGCTGATGCACTGCGTCGCGGGCCTGGACACCTTCTCGTCCGGCTCGGTGCGCATCGGCGAGACC
GAGCTGGGCTCGCTCAAGGACAAGCAGCTCACCAAGCTGCGCCGGGACAAGATCGGCTTCATCTTCCAGGCGTTCAACCT
GCTGCCGACGCTGACGGCGCTGGAGAACATCACCCTCCCGATGGACATCGCGGGCCGCAAGCCGGACAAGCAGTGGGTGG
ACTCCGTGATCGAGATGGTCGGGCTGTCCGGACGCCTCGGGCACCGGCCCGCCCAGCTCTCCGGCGGGCAGCAGCAGCGG
GTCGCCGTGGCGCGGGCGCTGGCCTCCCGGCCGGAGATCATCTTCGGGGACGAGCCGACCGGAAACCTCGACTCCCGTTC
CGGCGCCGAGGTGCTGGGCTTCCTGCGCAACTCGGTGCGGGAGCTGGGCCAGACCGTGGTGATGGTGACCCACGACCCGG
TGGCCGCCGCCTACGCGGACCGGGTGGTCTTCCTCGCGGACGGGCGCATCGTCGACGAACTGTACGGGCCGACGGCCGAC
TCGGTGCTCGACCGTATGAAGCGGTTCGACGCCAAGGGCCGCACCAGCTGA

Protein sequence : 
MTTAPIADRSTLVAARATELSKIYGQGETQVVALDRVSIDFRQAELTAIMGPSGSGKSTLMHCVAGLDTFSSGSVRIGET
ELGSLKDKQLTKLRRDKIGFIFQAFNLLPTLTALENITLPMDIAGRKPDKQWVDSVIEMVGLSGRLGHRPAQLSGGQQQR
VAVARALASRPEIIFGDEPTGNLDSRSGAEVLGFLRNSVRELGQTVVMVTHDPVAAAYADRVVFLADGRIVDELYGPTAD
SVLDRMKRFDAKGRTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-33 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCE25.30 NP_627308.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-34 47
SCE25.30 NP_627308.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-40 45
SCE25.30 NP_627308.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-35 44
SCE25.30 NP_627308.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-29 42
SCE25.30 NP_627308.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-28 42
SCE25.30 NP_627308.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 4e-17 41