Gene Information

Name : SC8E4A.16c (SCO2646)
Accession : NP_626882.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2878372 - 2879334 bp
Length : 963 bp
Strand : -
Note : SC8E4A.16c, possible integral membrane protein, len: 320 aa; similar to SW:PECM_ERWCH (EMBL:X74409) Erwinia chrysanthemi PecM protein, 297 aa; fasta scores: opt: 781 z-score: 802.2 E(): 0; 43.9% identity in 278 aa overlap and to TR:AAF10091 (EMBL:AE001910

DNA sequence :
ATGGCCGCCACCCGCCCCGCCGTCATCGCGCTCACCGCCCTCGCCCCCGTCTCCTGGGGCAGCACCTACGCCGTGACCAC
CGAGTTCCTGCCGCCCGACCGGCCCCTGTTCACCGGGCTGATGCGGGCTCTGCCCGCCGGCCTGCTGCTGCTCGCCCTCG
CCCGGGTGCTGCCGCGCGGCGCCTGGTGGGGGAAGGCGGCGGTGCTGGGGGTGCTGAACATCGGGGCCTTCTTCCCGCTG
CTGTTCCTCGCCGCCTACCGGATGCCCGGCGGAATGGCCGCCGTCGTCGGCTCGGTCGGCCCGCTCCTCGTCGTCGGCCT
CTCGGCCCTCCTGCTCGGGCAGCGGCCCACCACCCGGTCCGTTCTCACCGGTGTCGCCGCCGCGTCCGGCGTCAGCCTGG
TGGTGCTGGAGGCGGCCGGGGCGCTGGACCCGCTCGGCGTGCTGGCGGCCCTCGCCGCCACCGCCTCCATGTCCACCGGC
ACCGTGCTCGCGGGGCGCTGGGGCCGCCCCGAAGGCGTCGGCCCGCTCGCCCTCACCGGCTGGCAACTGACCGCGGGCGG
CCTGCTCCTGGCACCGCTCGCCCTGCTGGTCGAGGGTGCCCCGCCCGCCCTGGACGGCCCGGCCGTCGGCGGCTACCTCT
ACCTGGCGCTGGCCAACACGGCGCTGGCGTACTGGCTCTGGTTCCGCGGCATCGGCCGGCTCTCGGCCACTCAGGTCACC
TTCCTCGGACCGCTCTCGCCGCTGACCGCCGCCGTGATCGGCTGGGCGGCACTCGGCGAGGCGCTCGGCCCGGTGCAACT
GGCGGGGACGGCGCTGGCCTTCGGAGCGACCCTCGTGGGCCAGACGGTACCGAGCGCGCCGCGCACGCCGCCGGTCGCCG
CGGGCGCCGGTCCGTTCAGTTCTGCTTCACGAAACGGTCGAAAAGATTCGATGGACCTGACGGGTGCGGCCCTGCGACGG
TAG

Protein sequence :
MAATRPAVIALTALAPVSWGSTYAVTTEFLPPDRPLFTGLMRALPAGLLLLALARVLPRGAWWGKAAVLGVLNIGAFFPL
LFLAAYRMPGGMAAVVGSVGPLLVVGLSALLLGQRPTTRSVLTGVAAASGVSLVVLEAAGALDPLGVLAALAATASMSTG
TVLAGRWGRPEGVGPLALTGWQLTAGGLLLAPLALLVEGAPPALDGPAVGGYLYLALANTALAYWLWFRGIGRLSATQVT
FLGPLSPLTAAVIGWAALGEALGPVQLAGTALAFGATLVGQTVPSAPRTPPVAAGAGPFSSASRNGRKDSMDLTGAALRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 7e-17 49
pecM AGK07028.1 PecM Not tested SGI1 Protein 7e-17 49
pecM AGK07086.1 PecM Not tested SGI1 Protein 7e-17 49
pecM ACN81012.1 PecM Not tested AbaR5 Protein 9e-17 49