|
Name : SC8E4A.16c (SCO2646) Accession : NP_626882.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Resistance Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2878372 - 2879334 bp Length : 963 bp Strand : - Note : SC8E4A.16c, possible integral membrane protein, len: 320 aa; similar to SW:PECM_ERWCH (EMBL:X74409) Erwinia chrysanthemi PecM protein, 297 aa; fasta scores: opt: 781 z-score: 802.2 E(): 0; 43.9% identity in 278 aa overlap and to TR:AAF10091 (EMBL:AE001910 DNA sequence : ATGGCCGCCACCCGCCCCGCCGTCATCGCGCTCACCGCCCTCGCCCCCGTCTCCTGGGGCAGCACCTACGCCGTGACCAC CGAGTTCCTGCCGCCCGACCGGCCCCTGTTCACCGGGCTGATGCGGGCTCTGCCCGCCGGCCTGCTGCTGCTCGCCCTCG CCCGGGTGCTGCCGCGCGGCGCCTGGTGGGGGAAGGCGGCGGTGCTGGGGGTGCTGAACATCGGGGCCTTCTTCCCGCTG CTGTTCCTCGCCGCCTACCGGATGCCCGGCGGAATGGCCGCCGTCGTCGGCTCGGTCGGCCCGCTCCTCGTCGTCGGCCT CTCGGCCCTCCTGCTCGGGCAGCGGCCCACCACCCGGTCCGTTCTCACCGGTGTCGCCGCCGCGTCCGGCGTCAGCCTGG TGGTGCTGGAGGCGGCCGGGGCGCTGGACCCGCTCGGCGTGCTGGCGGCCCTCGCCGCCACCGCCTCCATGTCCACCGGC ACCGTGCTCGCGGGGCGCTGGGGCCGCCCCGAAGGCGTCGGCCCGCTCGCCCTCACCGGCTGGCAACTGACCGCGGGCGG CCTGCTCCTGGCACCGCTCGCCCTGCTGGTCGAGGGTGCCCCGCCCGCCCTGGACGGCCCGGCCGTCGGCGGCTACCTCT ACCTGGCGCTGGCCAACACGGCGCTGGCGTACTGGCTCTGGTTCCGCGGCATCGGCCGGCTCTCGGCCACTCAGGTCACC TTCCTCGGACCGCTCTCGCCGCTGACCGCCGCCGTGATCGGCTGGGCGGCACTCGGCGAGGCGCTCGGCCCGGTGCAACT GGCGGGGACGGCGCTGGCCTTCGGAGCGACCCTCGTGGGCCAGACGGTACCGAGCGCGCCGCGCACGCCGCCGGTCGCCG CGGGCGCCGGTCCGTTCAGTTCTGCTTCACGAAACGGTCGAAAAGATTCGATGGACCTGACGGGTGCGGCCCTGCGACGG TAG Protein sequence : MAATRPAVIALTALAPVSWGSTYAVTTEFLPPDRPLFTGLMRALPAGLLLLALARVLPRGAWWGKAAVLGVLNIGAFFPL LFLAAYRMPGGMAAVVGSVGPLLVVGLSALLLGQRPTTRSVLTGVAAASGVSLVVLEAAGALDPLGVLAALAATASMSTG TVLAGRWGRPEGVGPLALTGWQLTAGGLLLAPLALLVEGAPPALDGPAVGGYLYLALANTALAYWLWFRGIGRLSATQVT FLGPLSPLTAAVIGWAALGEALGPVQLAGTALAFGATLVGQTVPSAPRTPPVAAGAGPFSSASRNGRKDSMDLTGAALRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pecM | ACN81012.1 | PecM | Not tested | AbaR5 | Protein | 9e-17 | 49 |
| pecM | CAJ77067.1 | Regulatory protein | Not tested | AbaR1 | Protein | 7e-17 | 49 |
| pecM | AGK07028.1 | PecM | Not tested | SGI1 | Protein | 7e-17 | 49 |
| pecM | AGK07086.1 | PecM | Not tested | SGI1 | Protein | 7e-17 | 49 |
