|
Name : SCJ9A.32 (SCO0253) Accession : NP_624585.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Resistance Product : TetR family transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 242194 - 242766 bp Length : 573 bp Strand : + Note : SCJ9A.32, probable tetR-family transcriptional regulator, len: 190 aa; similar to many e.g. SW:TER1_ECOLI TetR tetracycline resistance repressor from Escherichia coli (216 aa) fasta scores; opt: 501, z-score: 616.1, E(): 5.9e-27, (44.5% identity in 200 aa DNA sequence : GTGACCAAGATGAACCGGGAGACGGTGATCACCGAGGCGCTCGACCTGCTCGACGAGGTGGGACTGGACGGCGTCAGCAC CCGGCGGCTGGCGAAGCGCCTGGGTGTCGAGCAGCCGTCGCTGTACTGGTACTTCCGCACCAAGAGGGATCTGCTGACGG CCATGGCGCAGGCCGCCATGGCCCCGCACGCGGCCGAACCGCTGCCGGAGCCGGGCGAGGACTGGCACGGCTGGTTCCTG CGGAACACGCGCAGTTTCAGGCGCACTCTGCTCGCCCGCCGTGACGGTGCACGCCTCCACGCCGGCAGCAGACCCACCGC CGACCTCGACAGGGTCCGCCGCAAGATGGACTTCCTCGTCGCGTCCGGGGTGCCCGAGCGCCACGCGCAGATGGCGATGC TCGCGGCCGGCCGCTTCACCGTCGGCTGCGTCCTGGAGGAGCAGGCGGAGACCGGCGCCGGTGACACGGCGGACCTCCCG GCCGATGTGCCGGAAATCGATCACGAGTCGGCGTTCGAGGCGGGGCTGGCCCTCATCACGGACGGGCTGGTCCGGCATGT GGACGCGAGGTAG Protein sequence : MTKMNRETVITEALDLLDEVGLDGVSTRRLAKRLGVEQPSLYWYFRTKRDLLTAMAQAAMAPHAAEPLPEPGEDWHGWFL RNTRSFRRTLLARRDGARLHAGSRPTADLDRVRRKMDFLVASGVPERHAQMAMLAAGRFTVGCVLEEQAETGAGDTADLP ADVPEIDHESAFEAGLALITDGLVRHVDAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetR | ABZ01841.1 | TetR | Not tested | SGI2 | Protein | 2e-19 | 46 |
| tetR | CAJ77033.1 | Tetracycline repressor protein | Not tested | AbaR1 | Protein | 2e-19 | 46 |
| tetR(G) | AGK06973.1 | TetR(G) | Not tested | SGI1 | Protein | 2e-19 | 46 |
| tetR(G) | AGK07103.1 | TetR(G) | Not tested | SGI1 | Protein | 2e-19 | 46 |
| tetR | AAK02050.1 | tetracycline resistance regulator protein | Not tested | SGI1 | Protein | 2e-19 | 46 |
| tetR(A) | ACK44536.1 | TetR(A) | Not tested | SGI1 | Protein | 1e-26 | 45 |
| tetR(A) | AGK07026.1 | TetR(A) | Not tested | SGI1 | Protein | 1e-26 | 45 |
| tetR | YP_006098395.1 | tetracycline repressor | Not tested | Tn2411 | Protein | 2e-26 | 45 |
| tetR(A) | AGK07084.1 | TetR(A) | Not tested | SGI1 | Protein | 1e-26 | 45 |
| tetR(A) | ACN81010.1 | repressor protein | Not tested | AbaR5 | Protein | 1e-26 | 45 |
| tetR | CAJ77065.1 | Tetracycline repressor protein | Not tested | AbaR1 | Protein | 1e-26 | 45 |
| tetR1 | YP_005176239.1 | tetracycline repressor protein | Not tested | ICEPmu1 | Protein | 3e-20 | 41 |
| tetR2 | YP_005176247.1 | tetracycline repressor protein | Not tested | ICEPmu1 | Protein | 3e-20 | 41 |
