|
Name : SCI8.07c (SCO1822) Accession : NP_626090.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Resistance Product : transmembrane transport protein Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 1952378 - 1954012 bp Length : 1635 bp Strand : - Note : SCI8.07c, possible transmembrane transport protein, len: 544 aa. A member of the sodium:solute symporter family it is similar to many including: Streptomyces coelicolor TR:O70003 (EMBL: AL022374) transmembrane transport SC5B8.17 (530 aa), fasta scores opt DNA sequence : ATGAGCCCCGCACAGTCCGTTTTCGCCGCCGAGCTGGCCGCCAACGAGGCCAGCGAGCACCGGCCGCTCATCATCACGCT CTTCGCGGTCTTCGTCCTCGCGACGCTCGGCATCACCGTCTGGGCGGGCCGCCAGACCAAGGACGCCGCCGACTTCTACG CGGGCGGCCGCCAGTTCAGTGCCTTCCAGAACGGCCTCGCCGTCTCCGGCGACTACATGTCGGCCGCGTCCTTCCTCGGC ATCGCCGGCGCCATCGCCCTCTTCGGCTACGACGGCTTCCTCTACTCCATCGGCTTCCTGGTCGCCTGGCTGGTCGCCCT GCTCCTGGTCGCCGAGCCGCTCAGGAACTCCGGCCGCTACACGATGGGCGACGTCCTCGCCTACCGCATGCGCCAGCGCC CGGTGCGCACCGCCGCCGGCACCTCCACGATCGTCGTCTCGATCTTCTACCTGCTGGCCCAGATGGCGGGCGCGGGCATC CTGGTCTCGCTGCTGCTCGGCATCACCTCCGACGCGGGCAAGATCCTCATCGTCGCCCTCGTCGGCGTCCTGATGATCGT GTACGTCACCATCGGCGGCATGAAGGGCACCACCTGGGTCCAGATGGTCAAGGCCGTGCTGCTGATCGGCGGCACCATCC TGATCACCTTCCTGGTGCTGCTGAAGTTCGACTTCAACATCTCCGACCTGCTCGGCAAGGCCGCCGAGAACAGCGGCGCG GGCTCCGCGTTCCTGGAGCCCGGCCTCCAGTACGGCGCGAGCGGCACCACCAAGCTGGACTTCATCTCCCTGGGCATCGC CCTGGTGCTCGGCACCGCCGGCCTGCCGCACATCCTGATCCGCTTCTACACGGTGCCCAACGCCAAGGCCGCCCGTAAGT CCGTGAACTGGGCCATCGGCATCATCGGAGCCTTCTACCTGATGACCATCGCCCTCGGCTTCGGCGCCGCGGCGCTCGTC GGCAAGGACGAGATCATCGCGTCCAACCCGTCCGGCAACACGGCGGCGCCCCTGCTCGCGCTGCACGTCGGCGGCGTCGA CTCGACCTGGGGCGCGATCCTGCTCGCCACGATCTCGGCGGTGGCCTTCGCGACCATCCTCGCCGTCGTCGCGGGCCTCA CCCTCGCCTCGTCCTCGTCCTTCGCGCACGACATCTACGCCAACGTCATCCGCAAGGGCCAGGCCACCGAGAAGGAGGAG ATGCGGGCGGCCCGCTGGGCGACCGTCTTCATCGGCATCGTCTCCATCGCGCTCGGCGCCCTCGCCCGGGACCTGAACGT GGCCGGTCTGGTCGCCCTGGCCTTCGCGGTCGCCGCGTCCGCCAACCTGCCGACCATCCTCTACAGCCTCTTCTGGAAGC GGTTCACCACCCAGGGCGCCCTGTGGTCGATCTACGGCGGCCTGATCGTCGCCGTCGGCCTGGTGCTGTTCTCGCCCGTC GTCTCCGGCGACCCGAAGGCGATGTTCCCGGACGTCGACTTCGCCTGGTTCCCGCTGAAGAACCCGGGCATCATCTCGAT TCCGTTCGGCTTCCTGATGGGCTGGCTCGGCACGGTCCTGTCGAAGGAGGAGCCGGACAAGGCGAAGTACGCGGAGCTGG AGGTCCGGTCCCTGACCGGCACCGGAGCGCACTGA Protein sequence : MSPAQSVFAAELAANEASEHRPLIITLFAVFVLATLGITVWAGRQTKDAADFYAGGRQFSAFQNGLAVSGDYMSAASFLG IAGAIALFGYDGFLYSIGFLVAWLVALLLVAEPLRNSGRYTMGDVLAYRMRQRPVRTAAGTSTIVVSIFYLLAQMAGAGI LVSLLLGITSDAGKILIVALVGVLMIVYVTIGGMKGTTWVQMVKAVLLIGGTILITFLVLLKFDFNISDLLGKAAENSGA GSAFLEPGLQYGASGTTKLDFISLGIALVLGTAGLPHILIRFYTVPNAKAARKSVNWAIGIIGAFYLMTIALGFGAAALV GKDEIIASNPSGNTAAPLLALHVGGVDSTWGAILLATISAVAFATILAVVAGLTLASSSSFAHDIYANVIRKGQATEKEE MRAARWATVFIGIVSIALGALARDLNVAGLVALAFAVAASANLPTILYSLFWKRFTTQGALWSIYGGLIVAVGLVLFSPV VSGDPKAMFPDVDFAWFPLKNPGIISIPFGFLMGWLGTVLSKEEPDKAKYAELEVRSLTGTGAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 3e-114 | 58 |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 4e-72 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCI8.07c | NP_626090.1 | transmembrane transport protein | BAC0570 | Protein | 1e-71 | 48 |
| SCI8.07c | NP_626090.1 | transmembrane transport protein | BAC0564 | Protein | 2e-74 | 44 |
