|
Name : SCI51.27c (SCO1787) Accession : NP_626058.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Virulence Product : iron-siderophore uptake system transmembrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 1910795 - 1911841 bp Length : 1047 bp Strand : - Note : SCI51.27c, probable iron-siderophore uptake system transmembrane component, len: 348 aa; similar to many transmembrane components from binding-protein-dependent iron uptake systems using a range of siderophores e.g. SW:FEPD_ECOLI (EMBL:X57471), fepD, Esch DNA sequence : GTGTTGGTCGACAGTCCCCCCGAACAGCGCGCGGAGACCGCTCCCGCGCCGCCCTCCAAGCGCCGTGTCCTGCGCGCAGC GGGGCTGCCCGTCTCCGTGGCGGCCCTGGTGCTCATCGTGTTGGCGAGCATCGCGATCGGTGCGAAGGACCTGTCCCTGG CGGAGGTCTGGCACGGCCTCTTCCACGACTCGGGCACCTACGGCGACGTCGTGGTCGGTGAGCGGCTGTCCCGTACCGTC CTCGGGCTGCTGGCCGGCGCCGCCCTCGGCCTCGCGGGAGCCGTGCTCCAGGCGCTCACCCGCAACCCGCTGGCCGATCC CGGACTCCTCGGCATCAACGCGGGCGCCTCGGCGGCCGTGGTCACGGGCATCACCTTCTTCGGCGTCACCTCGCTGACCG GGTACGTCTGGTTCGCCTTCGCCGGTGCGGCGGGGGTCGGCGCGCTGGTCTGGTTCCTGGGGGGCAGCCGGGGGGCCACG CCGGTGCGGCTGGTACTGGCCGGCACCGCGATCAGCGCCGCCCTCTTCGGCTACCTCCAAGCCGTGATGATCATGGACGA CGCGGCGCTGGGCCGGATGCGCTTCTGGACGGTCGGTTCGCTCGCCTCGGCGACGACCGGCACCATCCGCGAGGTACTGC CGTTCTTCGTGGTGGGCACGGTCCTCGCCCTCGCGCTCGCCCGGCCGCTCAACGCCATGGAGATGGGCGACGACACCGCC AAGGCCCTCGGCGCCAACCTGAACCGCACCCGGGCGCTGTCCATGCTCGCCGCGACCGTGCTGTGCGGCGCCGCGACCGC CGCCTGCGGGCCGATCGTGTTCGTCGGGCTGATGATCCCGCACATCGTCCGCTCCTTCACCGGACCCGACATGCGCTGGA TCCTGCCGTACGCGGCGATCCTGTCCCCGGTGCTGCTGCTGGGCGCGGACGTTCTCGGCCGGATCGTCGCACGGCCCTCG GAGCTCCAGGTCGGCATCATCACCGCCGTCCTCGGCGGGCCGGTCTTCATCTTTCTCGTACGACGGCGGAGGACGGCCCA GCTGTGA Protein sequence : MLVDSPPEQRAETAPAPPSKRRVLRAAGLPVSVAALVLIVLASIAIGAKDLSLAEVWHGLFHDSGTYGDVVVGERLSRTV LGLLAGAALGLAGAVLQALTRNPLADPGLLGINAGASAAVVTGITFFGVTSLTGYVWFAFAGAAGVGALVWFLGGSRGAT PVRLVLAGTAISAALFGYLQAVMIMDDAALGRMRFWTVGSLASATTGTIREVLPFFVVGTVLALALARPLNAMEMGDDTA KALGANLNRTRALSMLAATVLCGAATAACGPIVFVGLMIPHIVRSFTGPDMRWILPYAAILSPVLLLGADVLGRIVARPS ELQVGIITAVLGGPVFIFLVRRRRTAQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 1e-20 | 41 |
| fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 1e-20 | 41 |
| fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 1e-20 | 41 |
| fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 1e-20 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCI51.27c | NP_626058.1 | iron-siderophore uptake system transmembrane protein | VFG0926 | Protein | 2e-30 | 47 |
