|
Name : SCI51.25c (SCO1785) Accession : NP_626056.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Virulence Product : iron-siderophore uptake system ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1120 EC number : - Position : 1908769 - 1909674 bp Length : 906 bp Strand : - Note : SCI51.25c, probable iron-siderophore uptake system ATP-binding component, len: 301 aa; similar to many ATP-binding components from binding-protein-dependent iron uptake systems using a range of siderophores e.g. SW:FEPC_ECOLI (EMBL:X57471), fepC, Escheric DNA sequence : ATGAGCGCCGGCACCGGCCACCGCAGCGGGCCGAACAACCGAAGGAGCAACAGCAACGTGAACCGCCTGACCGCCGAGAA CGTCACCCTCGCCTACGACCAGCGGGTCATCGCGGAGAAGCTGTCGGTGGAGATACCCGACAACTCCTTCACCGTGATCG TCGGCCCGAACGCGTGCGGCAAGTCCACGCTGCTGCGCGCCCTGTCACGGATGCTCAGGCCGAGCCAGGGCCGGGTGCTG CTCGACGGATCGGTCATCCAGTCGATGCCCGCCAAGCAGGTCGCCCGGACCCTCGGCCTGCTCCCGCAGTCCTCCATCGC GCCCGACGGCATCACCGTCGGCGACCTCGTCGGCCGCGGCCGCTACCCGCACCAGGGAATCCTGCGTCAGTGGTCGACCG AGGACGAGCGGGTGGTCCAGGAGTCGATGGCCCGGACCGGCATCTCGGAGCTGGCCGACCGCTACGTCGACGAACTCTCC GGCGGACAGCGCCAGCGCGTGTGGATCGCCATGGCGCTGGCCCAGCAGACCCCGCTGCTGCTCCTCGACGAGCCGACGAC GTACCTGGACATCCAGCACCAGATCGACGTCCTCGACCTGTGCGCGGAACTCCACGAGGAGCAGGGGCGCACCCTCGTGG CCGTGCTGCACGACCTCAACCACGCCGCCCGCTACGCCACCCACCTCATCGCCCTGCGCGAGGGTCAGGTCATCGCCGAG GGCGCGCCGAAGGACATCGTCACCGCCGACCTGGTCGAGCGGGTCTTCGGGCTGCGCTGCCAGGTCATCGACGATCCCGA GACGGGTACGCCGCTGGTGGTGCCGGCCGCCCGCAAAGGGCGCACCAAGCAGGTGAACGAGCAGGTGACCGAGCAGGCGA AGGCGGTCGCTACAGGAGCTTCCTGA Protein sequence : MSAGTGHRSGPNNRRSNSNVNRLTAENVTLAYDQRVIAEKLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLRPSQGRVL LDGSVIQSMPAKQVARTLGLLPQSSIAPDGITVGDLVGRGRYPHQGILRQWSTEDERVVQESMARTGISELADRYVDELS GGQRQRVWIAMALAQQTPLLLLDEPTTYLDIQHQIDVLDLCAELHEEQGRTLVAVLHDLNHAARYATHLIALREGQVIAE GAPKDIVTADLVERVFGLRCQVIDDPETGTPLVVPAARKGRTKQVNEQVTEQAKAVATGAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iusE | YP_005143742.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 1e-64 | 53 |
| fagC | YP_005684488.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 3e-65 | 50 |
| fagC | YP_005680307.1 | ATP binding cytoplasmic membrane protein | Not tested | PiCp 1 | Protein | 3e-65 | 50 |
| fagC | YP_003782430.1 | ABC transporter ATP-binding protein | Not tested | PiCp 1 | Protein | 3e-65 | 50 |
| fagC | YP_005682397.1 | ATP binding cytoplasmic membrane protein | Virulence | PiCp 1 | Protein | 3e-65 | 50 |
| SPN23F_09560 | YP_002510939.1 | ferric siderophore ABC transporter ATP-binding protein | Virulence | PPI-1 | Protein | 4e-62 | 47 |
| SP_1035 | NP_345510.1 | iron-compound ABC transporter ATP-binding protein | Not tested | PPI-1 | Protein | 4e-62 | 47 |
| fecE | AAL08451.1 | ATP-binding protein FecE | Virulence | SRL | Protein | 7e-51 | 46 |
| DIP0585 | NP_938961.1 | iron ABC transporter ATP-binding protein | Virulence | Not named | Protein | 1e-52 | 43 |
| irp6C | YP_005124377.1 | ATP-binding protein Irp6C | Virulence | Not named | Protein | 1e-28 | 41 |
| irp6C | NP_938506.1 | ATP-binding protein Irp6C | Not tested | Not named | Protein | 1e-28 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCI51.25c | NP_626056.1 | iron-siderophore uptake system ATP-binding protein | BAC0164 | Protein | 4e-51 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCI51.25c | NP_626056.1 | iron-siderophore uptake system ATP-binding protein | VFG0925 | Protein | 2e-80 | 61 |
| SCI51.25c | NP_626056.1 | iron-siderophore uptake system ATP-binding protein | VFG1042 | Protein | 4e-51 | 46 |
