|
Name : SCI30A.27c (SCO1706) Accession : NP_625980.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1825638 - 1827026 bp Length : 1389 bp Strand : - Note : SCI30A.27c, probable aldehyde dehydrogenase, len: 462 aa; similar to many e.g. TR:O33455 (EMBL:U24215) P-cumic aldehyde dehydrogenase from Pseudomonas putida Fl (494 aa) fasta scores; opt: 1109, z-score: 1142.8, E(): 0, (44.6% identity in 471 aa overlap) DNA sequence : ATGAAGGCACACGACGGCATGTACATCGACGGAGCCTGGCGCCCCGCCGACGGCCGGGACACGATCGACGTCGTGAACCC GGTCGACGAGCAGGTGATCGGCAAGGTCCCCGCGGGCAGCGCCCTGGACGTCGACACCGCCGTACGGGCCGCCCGCGCCG CCCTGTCGGGCTGGGCCGCCACCCCGCCCGCCGAGCGGGCCGCACGCCTGGCCGCGCTGCGGGACGTCCTGGTGGCCCGC AAGGACGAGATCGCCGAGACGGTCACCGCCGAGCTGGGCTCCCCGCTGAAGTTCTCGCAGGCCGTGCACGCGGGCGCCCC GATCGCGGTCGCCGGTTCCTACGCCGAACTGGCGGCGACGCACGCCTTCGAGGAGAAGGTCGGCAACTCCGTGGTCCACC ACGAGCCGGTCGGCGTGGTCGGCGCCATCACCCCCTGGAACTACCCGCTCCACCAGATCGTCGCCAAGGCCGCCCCGGCG CTCGCGGCCGGCTGCACGATGGTGCTCAAGCCCGCCGAGGACGCCCCGCTCGTCGCGCAGCTCTTCGCCGAGGCGGTGCA CGAGGCCGGGATCCCCGCGGGCGTCTTCAACCTGGTCACCGGACTCGGCCCGGTCGCCGGACAGGCCCTCGTCGAGCACC CGGGTGTCGACCTGGTGTCCTTCACCGGTTCCACCGCCGTCGGCCGCCGGATCGGCGCCACCGCGGGCGCCGCCGTCAAG CGGGTCGCCCTCGAACTCGGCGGCAAGTCCGCCAACGTCATCCTTCCGAGCGCCGACCTGGCCAAGGCGGTCAACGTCGG CGTCGCCAACGTCATGTCCAACTCCGGTCAGACGTGCAGCGCCTGGACGCGGATGCTGGTCCACCGCGACCAGTACGACG AGGCGGTGTCGCTCGCCGCCGAGGCCGCCGCGAAGTACGGCGACCGGATCGGCCCCGTCGTCAACGCCGAGCAGCGGGAG CGGGTGCGCGGTTACATCGGGAAGGGCGTCGCCGAGGGCGCGCGCCTCGTCGCGGGCGGCCCCGAAGCCCCGCGCGAGCA GGGGTACTTCGTCAGCCCGACGGTCTTCGCGGACGTCACCGAGGAGATGACGATCGCCCAGGAGGAGATCTTCGGCCCCG TCCTGTCCATCCTCCGCTACGAGGACGAGGACGACGCCCTCCGGATCGCCAACGGCACGGTCTACGGGCTCGCCGGCGCC GTCTGGGCCGGGGACGAGGCCGACGCGGTCGCCTTCGCCCGCCGGATGGACACCGGGCAGGTCGACATCAACGGCGGCCG GTTCAACCCGCTGGCGCCCTTCGGCGGCTACAAGCAGTCGGGCGTGGGCCGCGAACTGGGCGCCCACGGCCTCACCGAGT ACCTCCAGACCAAGTCCCTCCAGTTCTAG Protein sequence : MKAHDGMYIDGAWRPADGRDTIDVVNPVDEQVIGKVPAGSALDVDTAVRAARAALSGWAATPPAERAARLAALRDVLVAR KDEIAETVTAELGSPLKFSQAVHAGAPIAVAGSYAELAATHAFEEKVGNSVVHHEPVGVVGAITPWNYPLHQIVAKAAPA LAAGCTMVLKPAEDAPLVAQLFAEAVHEAGIPAGVFNLVTGLGPVAGQALVEHPGVDLVSFTGSTAVGRRIGATAGAAVK RVALELGGKSANVILPSADLAKAVNVGVANVMSNSGQTCSAWTRMLVHRDQYDEAVSLAAEAAAKYGDRIGPVVNAEQRE RVRGYIGKGVAEGARLVAGGPEAPREQGYFVSPTVFADVTEEMTIAQEEIFGPVLSILRYEDEDDALRIANGTVYGLAGA VWAGDEADAVAFARRMDTGQVDINGGRFNPLAPFGGYKQSGVGRELGAHGLTEYLQTKSLQF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 6e-57 | 42 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-49 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCI30A.27c | NP_625980.1 | aldehyde dehydrogenase | VFG0082 | Protein | 1e-49 | 41 |
