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Name : SCJ30.11c (SCO0015) Accession : NP_624376.1 Strain : Streptomyces coelicolor A3(2) Genome accession: NC_003888 Putative virulence/resistance : Unknown Product : Na+/H+ antiporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3004 EC number : - Position : 16070 - 17302 bp Length : 1233 bp Strand : - Note : SCJ30.11c, possible Na+/H+ antiporter, len: 410 aa; similar to many eg. TR:Q56580 (EMBL:D25214) Na+/H+ antiporter from Vibrio alginolyticus (383 aa) fasta scores; opt: 536, z-score: 594.7, E(): 9.1e-26, (38.5% identity in 384 aa overlap). Also similar to DNA sequence : ATGTCTGCTCCCTCGCGGATCACTGCTGCCCTGCGCTCAGACGCGGTCGGTGGCTCTCTGCTGATCGGCGCCGCCGTCAT CGCGCTCATCTGGGCGAACTCGCCCCTGTCCCACTCCTACGAGGCCCTGCGCTCGTTCACCTTCGGCCCTTCCGCCCTCC ACCTGAACCTGTCCGTGGAGACGTGGGCGGCGGACGGGCTGCTGGCGGTGTTCTTCTTCATCGTCGGCAACGAGCTGAAG CAGGAACTCGTCCACGGCGAGCTGCGCGACCCACGCCGCGCGGCCCTGCCGATCGCCGCCGCGCTCGGCGGCGTCGCCGT GCCCGCCCTGGTCTTCCTGGCCTTCACCCTCGGCTCCGGCGGGGAGGCGGCCGGAGGCTGGGGCATCCCGATGGCTACCG GCATCGCCTTCGCCGTGGCCGTCCTGGCGGTGGTCGGCCGGCACCTGCCGACGCCGCTGCGGACCTTCCTGCTCACCCTG GCCACCGTGGACGACATGTCCGCGGTCCTGGTCATCGCCGTCGCCTGCACCAGCGGCATCAACTTCACCGCCCTCGCCTT GGCTGCCGTCGGCCTGGCCGTGTTCGGCTACTTGCAGAACGGGTCCGGGCGGGCGGTGGCCCGGGTGCGCGCGATGGTCC CGGCGTGGCTGCTGTTCGTGCCGCTGGCCGCGGTCGTCTGGGCGCTGATGCACGCCTGCGGTGTACACGCGACCATCGCC GGGGTCGTCATGGGCCTGTTGATGCGCACCCGCCCCCAGGGGGCGGAGCGGGTGTCGCCCTCGCACCGCGCGGAGGAGGT CTTGCGCCCGTTCTCCGCCGGGATCGCACTGCCGCTCTTCGCGCTGATGTCAGCCGGCGTCTCCCTGGCCGGGGCGGGAG GCTTCGTCACCTCCGCCATCACCTGGAACGTCCTCGCCGGCCTGCTCGTGGGCAAGGTCGTCGGGATCTTCGGCGGCACC TGGCCGACCAGCCGCCTCACCAGCGCCCACCTCAACCCGCTGCTCGGCTGGGCCGACATCGCCGGGATCGCCGTGCTGGG CGGGATCGGCTTCACGGTCTCCCTGCCGATCGCCGAACTCTCCTCCACCAGCCAGGCGCATCTCACCGACGCCAAGGGCG CCATCCTCCTGGCCTCCACCACCGCGGCCCTGCTCGCCGCGCTCCTGCTGGGCCGCCGCAGCCGCCACCACCAGCGCCTC GCCCGCCAGGCCGCGCAGCAGGCGACGACGTGA Protein sequence : MSAPSRITAALRSDAVGGSLLIGAAVIALIWANSPLSHSYEALRSFTFGPSALHLNLSVETWAADGLLAVFFFIVGNELK QELVHGELRDPRRAALPIAAALGGVAVPALVFLAFTLGSGGEAAGGWGIPMATGIAFAVAVLAVVGRHLPTPLRTFLLTL ATVDDMSAVLVIAVACTSGINFTALALAAVGLAVFGYLQNGSGRAVARVRAMVPAWLLFVPLAAVVWALMHACGVHATIA GVVMGLLMRTRPQGAERVSPSHRAEEVLRPFSAGIALPLFALMSAGVSLAGAGGFVTSAITWNVLAGLLVGKVVGIFGGT WPTSRLTSAHLNPLLGWADIAGIAVLGGIGFTVSLPIAELSSTSQAHLTDAKGAILLASTTAALLAALLLGRRSRHHQRL ARQAAQQATT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nhaA1 | YP_001220808.1 | NahA family Na(+)/H(+) antiporter | Not tested | chp/tomA region | Protein | 3e-42 | 50 |
