Gene Information

Name : SCL2.13c (SCO1523)
Accession : NP_625802.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1627456 - 1628367 bp
Length : 912 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
GTGTCCAGCACGCTCTCCGAGAACCAGGCACCCGAGACCGGCACCGCCCGCGTGAAGCGCGGTATGGCCGAGCAGCTCAA
GGGCGGCGTCATCATGGACGTCGTCACGCCGGAGCAGGCGAAGATCGCCGAGGACGCGGGCGCCGTGGCCGTCATGGCCC
TGGAGCGCGTCCCCGCCGACATCCGCAAGGACGGCGGCGTGGCCCGGATGTCCGACCCGGACATGATCGAGGGCATCATC
GGCGCCGTGTCCATCCCGGTGATGGCCAAGTCCCGCATCGGCCACTTCGTGGAGGCCCAGGTCCTGCAGTCCCTCGGCGT
CGACTACATCGACGAGTCCGAGGTCCTCACCCCGGCCGACGAGGTCAACCACAGCGACAAGTTCGCCTTCACCACCCCCT
TCGTCTGCGGCGCCACCAACCTGGGCGAGGCCCTGCGGCGGATCGCCGAGGGTGCCGCGATGATCCGCTCCAAGGGCGAG
GCCGGCACCGGCAACGTCGTCGAGGCCGTTCGCCACCTGCGCCAGATCAAGAACGAGATCGCCCGGCTGCGCGGCTACGA
CAACAACGAGCTGTACGCCGCTGCCAAGGAGCTGCGCGCCCCGTACGAGCTGGTCAAGGAGGTCTCCGAGCTGGGCAGGC
TCCCCGTGGTGCTCTTCTCGGCCGGTGGCGTCGCGACCCCCGCCGACGCCGCGCTCATGCGCCAGCTCGGCGCCGAGGGC
GTCTTCGTCGGCTCCGGCATCTTCAAGTCCGGCGACCCGGCCAAGCGCGCCGCCGCCATCGTGAAGGCGACCACCTTCTA
CGACGACCCGAAGATCATCGCGGACGCGTCCCGCAACCTCGGCGAGGCCATGGTCGGCATCAACTGCGACACCCTCCCCG
AGACCGAGCGCTACGCCAACCGCGGCTGGTAA

Protein sequence :
MSSTLSENQAPETGTARVKRGMAEQLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRKDGGVARMSDPDMIEGII
GAVSIPVMAKSRIGHFVEAQVLQSLGVDYIDESEVLTPADEVNHSDKFAFTTPFVCGATNLGEALRRIAEGAAMIRSKGE
AGTGNVVEAVRHLRQIKNEIARLRGYDNNELYAAAKELRAPYELVKEVSELGRLPVVLFSAGGVATPADAALMRQLGAEG
VFVGSGIFKSGDPAKRAAAIVKATTFYDDPKIIADASRNLGEAMVGINCDTLPETERYANRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 8e-106 77
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 6e-106 77
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 7e-106 77