Gene Information

Name : SCG11A.05; thcA (SCO1174)
Accession : NP_625464.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1237012 - 1238535 bp
Length : 1524 bp
Strand : +
Note : SCG11A.05, thcA, aldehyde dehydrogenase, len:534 aa; highly similar to SW:THCA_RHOSN (EMBL:U17129) Rhodococcus sp. (strain NI86/21) EPTC-inducible aldehyde dehydrogenase (EC 1.2.1.3) ThcA, 505 aa; fasta scores: opt: 2639 z-score: 3078.6 E(): 0; 75.7% iden

DNA sequence :
ATGACCCGTTACGCGGCGCCCGGCACCGAGGGCGCGATCGTCTCCTATCAGTCGCGCTACGACCACTTCATCGGCGGCGA
GTACGTGCCACCGGCGCGCGGGCAGTACTTCGAGAACCCGTCCCCGGTGAACGGCCTGCCGTTCACCGAGATCGCGCGCG
GCACGGCCGACGACGTGGAACGGGCGCTCGACGCCGCGCACGAGGCCGCTCCGGGCTGGGGCCGTACCTCGGTGACCGAG
CGTTCCGACATCCTCCTGAAGATCGCCGACCGCATGGAGGCGAACCTGGAGCGCCTGGCGGTCGCGGAGAGCTGGGAGAA
CGGCAAGCCGGTGCGCGAGACTCTGGCGGCCGACATCCCCCTCGCCATCGACCACTTCCGCTACTTCGCGGGCGCGGTGC
GCGCCCAGGAGGGCTCACTCGGCGAGATCGACGACGACACCGTGGCGTACCACTTCCACGAACCGCTGGGGGTCGTCGCC
CAGATCATCCCGTGGAACTTCCCGATCCTGATGGCCACCTGGAAGCTCGCGCCCGCCCTCGCCGCCGGCAACGCCGTGGT
CCTGAAGCCCGCGGAGCAGACCCCGGCCTCGATCCACTACTGGCTGAGCCTGGTGGCGGACCTGCTGCCGCCCGGGGTCC
TGAACGTCGTCAACGGCTTCGGGGTGGAGGCGGGCAAACCGCTCGCGTCGAGCCCCCGGGTGGCGAAGGTGGCGTTCACC
GGCGAGACCACCACCGGGCGGCTGATCATGCAGTACGCCTCGGAGAACATCAAACCGGTCACGCTGGAGCTGGGCGGCAA
GTCGCCGAACATCTTCTTCGAGGACGTCTGGGCGCGGGACGACGACTTCCGCGACAAGGCGCTCGAGGGCTTCACCATGT
TCGCGCTCAACCAGGGGGAGGTCTGCACCTGTCCGTCCCGCGCGCTCGTCCAGCGGGGCGTCTACGCCGAGTTCATGGAG
GCAGCCGTCGCGCGCACCGAGTTGATCAAGCCCGGTCACCCCCTGGACACCGACACGATGATCGGCGCCCAGGCCTCCAA
CGACCAGTTGGAGAAGATCCTCTCCTACCTGGACATCGGCCGCCAGGAGGGCGCGAAGGTACTCACCGGTGGTGAGCGGA
TCGAGCACGACGGCGAGTTGAAGGGCGGCTACTACGTCCAGCCGACGATCTTCGAGGGCCACAACCGCATGCGGATCTTC
CAGGAGGAGATCTTCGGCCCGGTGGTGTCGGTGACGTCCTTCGACGACTTCGACGACGCCGTCAAGACCGCCAACGACAC
CCTGTACGGCCTCGGCGCCGGGGTGTGGACCCGCGACATGAACACCGCGTACCGCGCGGGCCGCGCGATCCAGGCGGGAC
GCGTGTGGACGAACTGCTACCACGCATACCCGGCGCACGCCGCCTTCGGCGGCTACAAGCAGTCGGGCATCGGCCGGGAG
AACCACAAGATGATGCTGGAGCACTACCAGCAGACGAAGAACATTCTTTGTTCCTACAGCCCCAAGAAACTCGGGTTCTT
CTAG

Protein sequence :
MTRYAAPGTEGAIVSYQSRYDHFIGGEYVPPARGQYFENPSPVNGLPFTEIARGTADDVERALDAAHEAAPGWGRTSVTE
RSDILLKIADRMEANLERLAVAESWENGKPVRETLAADIPLAIDHFRYFAGAVRAQEGSLGEIDDDTVAYHFHEPLGVVA
QIIPWNFPILMATWKLAPALAAGNAVVLKPAEQTPASIHYWLSLVADLLPPGVLNVVNGFGVEAGKPLASSPRVAKVAFT
GETTTGRLIMQYASENIKPVTLELGGKSPNIFFEDVWARDDDFRDKALEGFTMFALNQGEVCTCPSRALVQRGVYAEFME
AAVARTELIKPGHPLDTDTMIGAQASNDQLEKILSYLDIGRQEGAKVLTGGERIEHDGELKGGYYVQPTIFEGHNRMRIF
QEEIFGPVVSVTSFDDFDDAVKTANDTLYGLGAGVWTRDMNTAYRAGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRE
NHKMMLEHYQQTKNILCSYSPKKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-146 61
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-151 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-151 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-151 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-151 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCG11A.05; thcA NP_625464.1 aldehyde dehydrogenase VFG0082 Protein 3e-146 61