Gene Information

Name : 2SCG2.18; IS110-B (SCO1005)
Accession : NP_625301.1
Strain : Streptomyces coelicolor A3(2)
Genome accession: NC_003888
Putative virulence/resistance : Unknown
Product : insertion element
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 1060181 - 1061398 bp
Length : 1218 bp
Strand : +
Note : 2SCG2.18, IS110-B, insertion element, len: 405 aa; identical to previously sequenced SW:YIS1_STRCO (EMBL:Y00434) Streptomyces coelicolor insertion element IS110 hypothetical 43.6 kDa protein SC3C8.10, 405 aa. Contains Pfam match to entry PF01548 Transposa

DNA sequence :
ATGTTCGACACCGAAGACGTGGGCGTGTTCCTCGGCCTGGACGTCGGCAAGACCGCTCACCACGGCCACGGACTCACCCC
GGCCGGGAAGAAGGTCCTCGACAAGCAGCTGCCCAACAGCGAGCCGAGACTGCGGGCCGTCTTCGACAAGCTGGCCGCGA
AGTTCGGCACGGTCCTGGTGATCGTGGACCAGCCCGCTTCCATCGGCGCCCTCCCGCTCACGGTCGCCCGGGACGCCGGC
TGCAAGGTCGCCTACCTGCCCGGCCTGGCGATGCGGCGGATCGCCGACCTGTATCCCGGCGAGGCCAAGACCGACGCGAA
GGACGCAGCGGTCATCGCGGACGCGGCCCGCACGATGGCGCACACCCTGCGTTCCCTGGAGCTCACCGACGAGATCACCG
CCGAGCTCTCGGTCCTCGTCGGCTTCGACCAGGACCTCGCGGCCGAGGCCACCCGCACCTCCAACCGGATACGCGGCCTG
CTCACCCAGTTCCACCCCTCGCTGGAGCGCGTCCTGGGCCCCCGCCTCGACCACCAGGCCGTCACTTGGCTGCTGGAGCG
CTACGGCTCTCCGGCCGCACTGCGCAAAGCCGGACGCCGCAGGCTCGTCGAGCTCGTCCGGCCCAAGGCCCCGCGCATGG
CCCAGCGGCTGATCGACGACATCTTCGACGCCCTGGACGAGCAGACCGTCGTGGTCCCGGGAACCGGCACCCTCGACATC
GTCGTGCCCTCCCTGGCCAGCTCTCTCACCGCTGTCCACGAACAGCGCCGGGCCCTGGAAGCCCAGATCAACGCCCTGCT
GGAGGCCCACCCTCTTTCCCCGGTCCTGACGTCGATGCCCGGCGTCGGCGTCAGGACCGCCGCCGTCCTGCTGGTCACCG
TCGGCGACGGCACCAGCTTCCCCACCGCCGCCCACCTGGCCTCCTACGCCGGACTCGCCCCGACCACGAAGTCGTCCGGT
ACCTCGATCCACGGCGAACACGCGCCCCGAGGCGGCAACCGCCAGCTCAAACGCGCCATGTTCCTGTCCGCCTTCGCCTG
CATGAACGCCGACCCCGCCTCCCGCACCTACTACGACCGCCAGCGAGCCCGCGGCAAAACCCACACCCAGGCCCTCCTCC
GCCTCGCCCGCCAACGCATCAGCGTCCTGTTCGCCATGCTCCGAGACGGCACCTTCTACGAATCCCGCATGCCCGCGGGC
GTCGAGCTCGCGGCATGA

Protein sequence :
MFDTEDVGVFLGLDVGKTAHHGHGLTPAGKKVLDKQLPNSEPRLRAVFDKLAAKFGTVLVIVDQPASIGALPLTVARDAG
CKVAYLPGLAMRRIADLYPGEAKTDAKDAAVIADAARTMAHTLRSLELTDEITAELSVLVGFDQDLAAEATRTSNRIRGL
LTQFHPSLERVLGPRLDHQAVTWLLERYGSPAALRKAGRRRLVELVRPKAPRMAQRLIDDIFDALDEQTVVVPGTGTLDI
VVPSLASSLTAVHEQRRALEAQINALLEAHPLSPVLTSMPGVGVRTAAVLLVTVGDGTSFPTAAHLASYAGLAPTTKSSG
TSIHGEHAPRGGNRQLKRAMFLSAFACMNADPASRTYYDRQRARGKTHTQALLRLARQRISVLFAMLRDGTFYESRMPAG
VELAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 5e-92 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
2SCG2.18; IS110-B NP_625301.1 insertion element VFG1494 Protein 3e-92 59