|
Name : TTE0668 (TTE0668) Accession : NP_622330.1 Strain : Thermoanaerobacter tengcongensis MB4 Genome accession: NC_003869 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 669876 - 671747 bp Length : 1872 bp Strand : + Note : Best Blastp hit = gi|10176342|dbj|BAB07437.1| (AP001519) capsular polysaccharide biosynthesis [Bacillus halodurans], score 482, E-value 1.00E-135 DNA sequence : ATGTGGAAAAACAAGAGAAAAATTTTATTATTGCTTATTGACATTATCCTATTGAATATAGCATATTTTCTAGCTTTTTA TTTGCGCTTTGACTATAATATTCCCCACCAATATTTTCTCTTATACAAAAAAACCTTTTACATAGTAGTTACAGTGACTG TCGTAACATTTATCTTTTTCAAACAATACAATAAAATCTGGAGATATGCAAGTTTACATGATATTATGGATTTAATTATT TTTACTACCATTGGCAGCGCTATGGCTGCTTTTGTTTTACTATTTTTACAAATACATTTGCCACGTTCTATTTATCCTTT ATACTGGTTTTTGAGTGCATTGCTAATAGGTGGAAGTCGTATTGCTTATAGAAGTTATATGGAAAATAGCAGTAAAGTTA AAGTAAAGAATATAAAATACAAAAAAGTGTTAATAGTAGGTGCTGGAGATGCTGGGCGTATACTTGTAAGGGAGATAAAA AATCATCCAGAAACAGGCCTTAAGCCTGTAGCAATAGTAGATGATGATGTGTCTAAATTACACAGAAGTATTGATGATGT GCCTGTTGTGGGGAAAATTGATGATATTCAGGAAGTTATTACGGAGAAGGAAATTGATGAAGTTATTTTTGCTATCCCTT CTGCGCCTAGAACTGTTTTGAAAAAAGTTATTGATAAATGTAGTGAAATGCGCATAAAAGTTAAGACATTGCCAGCTATT TATGAGTTAGTTGATGGAACAATATCAATAAGTAGCATAAGGGATGTTGATATAAATGATTTGTTAGGTAGAGAACCTGT CAAAATTGATTTAGAGGAAATAAGTAGCTACATAAAAGGTAAAAAAGTTATGGTTACAGGTGGAGGAGGGTCCATTGGGT CTGAACTTTGCAGACAAATAGCCCGATTTTCACCCTCTCGCCTTATTATACTAGACATATACGAAAACAATATGTATGAA GTAGAACAGGAATTAAAAAGAAAATACCCTGAACTTGATGTAATTTGCTTAGTCGCAAATATTAGAGAAGAAAAGAAGAT AAATAAAATTTTTAGTGAGTATACTCCTGATATTGTTTTTCACGCAGCTGCTCATAAACATGTTCCACTAATGGAGGTAA GTCCTCATGAAGCTATTAAAAACAATGTATATGGTACATTGAATCTTGTAAAAGTTTCTGACTTATATAATGTCAATCGC TTTGTAATGATTTCGACAGATAAGGCTGTCAATCCTACGAGTGTGATGGGAGCTTCTAAGCGCATATGTGAGATGATAAT TCAAGAATACGATAAAAAAAGTAAAACTGAGTTTGTTGCAGTGCGATTTGGAAATGTGTTGGGAAGCAATGGAAGCGTTA TACCTCTTTTTAAAAAGCAGATTGCAGAAGGTGGACCTGTTACGGTGACTCATGAAGAAATTAAAAGATACTTTATGACA ATACCAGAAGCTGTTCAGTTGGTTATACAAGCAGGGGCTATGGCAAAGGGCGGCGAAATATTTGTACTTGATATGGGTGA ACCGGTTAAAATTATAGATTTAGCAAGAACGTTAATTCGGTTATCGGGTTTTGAGCCTGATGTAGATATACCTATTAAGA TTATTGGTTTAAGACCAGGAGAGAAATTATTTGAGGAATTATTAATAAGTGATGATAAATACGTGTCGACGAAGCATGAG AAAATTTTTATTGAAAAGCCCGTTTCTGTCGATTATGGGGATTTAATTTTAACATTGGAAAAATATAAAGATAAGATAGA TGATATGGATGAAGATGAAATAAGAGAGTTTATAAAGTCCCTTGTGCCAGAGTATAATCCTGATTATCAGCGGTCCTTAA TGGAAGAAGTTGCCGCTACTGAAATAGAATAG Protein sequence : MWKNKRKILLLLIDIILLNIAYFLAFYLRFDYNIPHQYFLLYKKTFYIVVTVTVVTFIFFKQYNKIWRYASLHDIMDLII FTTIGSAMAAFVLLFLQIHLPRSIYPLYWFLSALLIGGSRIAYRSYMENSSKVKVKNIKYKKVLIVGAGDAGRILVREIK NHPETGLKPVAIVDDDVSKLHRSIDDVPVVGKIDDIQEVITEKEIDEVIFAIPSAPRTVLKKVIDKCSEMRIKVKTLPAI YELVDGTISISSIRDVDINDLLGREPVKIDLEEISSYIKGKKVMVTGGGGSIGSELCRQIARFSPSRLIILDIYENNMYE VEQELKRKYPELDVICLVANIREEKKINKIFSEYTPDIVFHAAAHKHVPLMEVSPHEAIKNNVYGTLNLVKVSDLYNVNR FVMISTDKAVNPTSVMGASKRICEMIIQEYDKKSKTEFVAVRFGNVLGSNGSVIPLFKKQIAEGGPVTVTHEEIKRYFMT IPEAVQLVIQAGAMAKGGEIFVLDMGEPVKIIDLARTLIRLSGFEPDVDIPIKIIGLRPGEKLFEELLISDDKYVSTKHE KIFIEKPVSVDYGDLILTLEKYKDKIDDMDEDEIREFIKSLVPEYNPDYQRSLMEEVAATEIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 9e-99 | 49 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-94 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TTE0668 | NP_622330.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 1e-93 | 45 |
| TTE0668 | NP_622330.1 | nucleoside-diphosphate sugar epimerase | VFG0029 | Protein | 5e-79 | 44 |
